Sequence of DPV Pelargonium zonate spot virus
Pelargonium zonate spot virus genomic RNA1 for 1a protein, (ORF1)
ACC No: AJ272327
Dated: 2003-10-30 | Length: 3383 | CRC: -1304025167
!!NA_SEQUENCE 1.0
ID PZO272327 standard; genomic RNA; VRL; 3383 BP.
XX
AC AJ272327;
XX
SV AJ272327.1
XX
DT 16-SEP-2000 (Rel. 65, Created)
DT 30-OCT-2003 (Rel. 77, Last updated, Version 2)
XX
DE Pelargonium zonate spot virus genomic RNA1 for 1a protein, (ORF1)
XX
KW 1a protein; genomic RNA1.
XX
OS Pelargonium zonate spot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae.
XX
RN [1]
RP 1-3383
RA Finetti M.M.;
RT ;
RL Submitted (17-FEB-2000) to the EMBL/GenBank/DDBJ databases.
RL Finetti M.M., Dipartimento Protezione Piante e Microbiologia Applicata,
RL Universita degli Studi di Bari, Via Amendola 165/A, Bari, 70126, ITALY.
XX
RN [2]
RA Finetti-Sialer M.M., Gallitelli D.;
RT "Complete nucleotide sequence of Pelargonium zonate spot virus and it's
RT relationship with the family Bromoviridae";
RL J. Gen. Virol. 84(11):3143-3151(2003).
XX
DR GOA; Q9DUT3.
DR SPTREMBL; Q9DUT3; Q9DUT3.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3383
FT /country="Italy:Apulia"
FT /db_xref="taxon:116056"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pelargonium zonate spot virus"
FT /strain=" tomato"
FT /specific_host="Lycopersicon esculentum"
FT /lab_host="Nicotiana glutinosa"
FT CDS 79. .2967
FT /db_xref="GOA:Q9DUT3"
FT /db_xref="SPTREMBL:Q9DUT3"
FT /note="ORF1"
FT /protein_id="CAC08526.1"
FT /translation="MAATSFNVRDLINSNGADAMGVRGLVDAHATKAAEEQFEYIKRSK
FT KVWVRQILSASDGEKMQKRFGGTFDLQLSKNLCPHSFAGAMRQCETLECLSSFPEDSLI
FT LDFGGSWLFHWQRQHNVHSCCPVLDARDMARHQERMISMQKCVAHRPGKFESFESPDFC
FT LLKAEDCEVQSPYAISIHGAYDMGFEGLCKAMHSHGTIMLRGTMMFDANMLVFNEGVME
FT DLNCRWTKEKGDPYGLRGAPCEDMVHFDFIDESTLSYSHSWKNIKSFLTEGGYQIGNVQ
FT YVLERCVISYGIMSFKIFAVSGKIPHTRLRHCVWFPKVRDYVNINPSDPRIWSKVRVKL
FT DTVREVEEICFRCPKDVSKIEVMGGESETCGIMSVLYSSTIIVNGMTMMAGERLDVLDY
FT HHVAFSLMLSARRKFDMFGKAMNSLEWKGWVSHFFKSLWPSGDLRDLFGRYFPSLIRYY
FT DKIEFVEKLTHCEVFVNELGMTDDKEQRDVVAEAADVLKNTLLKVAIKMSLDKTFRPAE
FT EKKEERTTTTTVTSSAVGDVDERPAGTVSGPTIQAPSVTQENTVTSLSEPLDGRLAVRL
FT EAMKEYKRYLLKLQKNTESNLAGLWSLCGGTSDSNNLISTEVLRIMRQSDSLVNLHKAD
FT GGWLFPNDFEYMVGYNSSGLGEKRPNEVFLVNKDCVLNNNVLLANGVPAQPPKGNINLM
FT DGVAGCGKTTAIKRAFVFESDLIVTANKKSSEDILKAMFRDTPDIGRNKVRTADSVLMH
FT GVAHKVKRVLFDEVSLVHFGQLCAILTISGAEELIGFGDSEQISFVSRDRLFDMKYHKL
FT SPDSSDQQIRTFRCPKDVVECVKIMARKVGARGSKYNNWFTTSAVRKSLGYHKVSSINE
FT SPLRPDVHYLTMTQADKASLLSKARETRFRPSVSTIDEVIKTTHESQGISVPKVILWRG
FT KSTKCDLFTDKMELRFGCCHQASRKFRLLFGC"
XX
SQ Sequence 3383 BP; 922 A; 617 C; 854 G; 990 T; 0 other;
AJ272327 Length: 3383 November 11, 2003 09:07 Type: N Check: 5713 ..
1 ggtttgagtg cattttgtgt atttggttca attccaaatc gattaagtga
51 cattcttact tacagctatc agttcataat ggctgctact tcttttaatg
101 ttcgtgacct cattaactcc aatggtgctg atgctatggg agttaggggg
151 ttggtagacg cccacgccac aaaagctgcc gaggagcagt tcgagtacat
201 caaacgctcg aagaaagtgt gggtaaggca aattctctcc gcttcagatg
251 gtgaaaagat gcagaaaagg tttggcggaa ctttcgatct gcaattgtcc
301 aagaatttat gcccacatag ctttgctggg gctatgagac agtgcgaaac
351 tttggagtgt ttatcttcgt ttcccgagga ctccctaatt ctcgactttg
401 ggggttcctg gttatttcat tggcagaggc agcacaatgt tcatagttgt
451 tgcccagtgt tggatgccag ggatatggcg cgtcaccaag aaagaatgat
501 ctcgatgcag aagtgtgtgg cgcacagacc tggtaaattt gagtcctttg
551 aaagtcctga tttctgtttg ttgaaagctg aagattgtga agtgcagagt
601 ccctatgcta tctccattca cggagcgtac gacatggggt ttgagggttt
651 gtgcaaggct atgcactcac acggaaccat tatgcttaga ggtaccatga
701 tgttcgatgc taacatgctc gtttttaacg aaggggttat ggaagacttg
751 aactgtcgtt ggactaaaga gaaaggggat ccgtatggcc taagaggggc
801 accctgtgag gacatggttc attttgattt tattgatgaa agtactttgt
851 cttactcgca ctcatggaag aacataaaat cttttctcac tgaaggtggt
901 tatcaaatag ggaacgtgca gtatgtgctt gagaggtgcg tgatttctta
951 tgggatcatg tcttttaaaa tctttgccgt ttcggggaaa atccctcaca
1001 ctcgcctgag acattgtgtt tggtttccta aggttcgtga ctatgttaat
1051 atcaacccta gtgaccctcg catttggtca aaggtgcgcg tgaaattgga
1101 caccgtcaga gaagtcgagg agatttgttt cagatgcccc aaagatgttt
1151 caaagatcga agtcatggga ggagaatctg aaacttgtgg gatcatgtct
1201 gtcctctact cttccactat tattgtgaac ggaatgacta tgatggccgg
1251 agaaaggcta gacgttcttg attatcacca cgtggccttt tccctcatgt
1301 tatcagcacg acgaaagttc gatatgttcg ggaaagcaat gaattcgttg
1351 gaatggaagg gttgggtgag tcatttcttt aaatctcttt ggccctctgg
1401 ggaccttcgg gacctattcg gacgttattt tcctagtttg attcgttatt
1451 acgacaaaat tgagtttgtt gaaaaactta ctcattgcga agttttcgtg
1501 aacgaactgg ggatgaccga cgataaggaa caaagggatg tggttgctga
1551 ggcggctgat gttcttaaga acactctgct taaagttgct attaagatgt
1601 ctctagacaa aactttcaga cctgctgaag aaaagaaaga agagagaaca
1651 acaacaacaa ctgttaccag tagtgccgtt ggtgacgttg atgaaagacc
1701 ggctggcacc gtttcagggc ctacgataca ggccccttcc gtgacgcaag
1751 agaacaccgt gacgtcgttg agtgaaccgc tggatggcag acttgctgtg
1801 agactagagg ctatgaaaga atataaacgc tatcttctta aacttcagaa
1851 aaatacagag tcgaatttag ctgggttgtg gtcgctttgt ggtggtacca
1901 gcgacagtaa caacctgatc agcactgaag tattgaggat aatgagacag
1951 agtgatagcc tggttaactt gcacaaggct gatggtggct ggctttttcc
2001 gaacgatttt gagtatatgg tcggttacaa ttcgagcggg cttggagaaa
2051 agcgccctaa tgaggtattc ttggttaaca aagattgtgt tctgaacaat
2101 aatgtcctgc ttgctaatgg tgttcccgcg caaccaccta aaggcaacat
2151 caacttgatg gatggtgttg ctgggtgtgg gaaaacgacc gcgataaaaa
2201 gggcttttgt gttcgagagc gatttgatcg taactgccaa caagaaatct
2251 tctgaggaca tattgaaggc gatgtttcgt gataccccag acattggtag
2301 aaataaggtg agaactgctg attcagtgct gatgcatggg gttgcacata
2351 aagttaagcg agtgcttttt gatgaagtga gtttggtgca ttttggtcag
2401 ttgtgcgcaa ttcttactat ttctggtgcg gaagaactga ttggtttcgg
2451 tgattctgaa cagatatcat ttgtatctcg tgataggctc tttgacatga
2501 aatatcacaa gctttctcca gacagttcgg accaacagat taggaccttc
2551 agatgcccca aagatgtggt ggaatgtgta aagatcatgg ctcgcaaagt
2601 gggtgctaga gggtctaagt ataacaattg gttcacgact tcggctgtta
2651 gaaagtctct cgggtatcat aaagtatcat ctattaatga atcgcccttg
2701 agaccggatg ttcactactt aacaatgaca caagcagata aagctagttt
2751 actctcaaaa gccagggaaa caaggtttcg acctagtgtc tctacgattg
2801 atgaggttat taaaactacg catgaatctc aaggtatttc cgttccgaaa
2851 gttatacttt ggagagggaa atcgacgaaa tgtgatctgt ttaccgataa
2901 aatggaacta cgctttggtt gctgtcacca ggcgtcacga aagtttcgat
2951 tattattcgg ttgctgatat caaaggagat ttcatagctg agtgcattga
3001 aagcacgaag cggcttgtca taaattaggt agttcatgga agtacatggt
3051 gatagatcac cggttataac actttcctta aagtgtaatc gtcgttgaga
3101 cgttgatggt gataattcac tggttttaat actttccgta aagtataatc
3151 gtcgttgaga cgttgatagt gataattcac tagttttaac attttctata
3201 aaatgtaatc gtcgttaaga cgttgagtgc ttacaagcaa tcaagacacg
3251 tatcccgaga ctctctgtcg ggtgcaacaa gatattcctc atgaggaata
3301 atagatcttg cgtgtcgctg gagtaattga atgtgttggg aaacacattc
3351 ttttcttcgg tttctctaag agagaccaaa aag