Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus (strain ALS-IPO) CP gene for coat protein, genomic RNA

ACC No: AJ276587

Dated: 2002-02-10 | Length: 1118 | CRC: -378795127

                !!NA_SEQUENCE 1.0
ID   CMO276587  standard; RNA; VRL; 1118 BP.
XX
AC   AJ276587;
XX
SV   AJ276587.1
XX
DT   10-FEB-2002 (Rel. 70, Created)
DT   10-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Cucumber mosaic virus (strain ALS-IPO) CP gene for coat protein, genomic
DE   RNA
XX
KW   coat protein; cp gene; RNA3.
XX
OS   cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-1118
RA   Chen Y.K.;
RT   ;
RL   Submitted (13-MAR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Chen Y.K., Lab. of Virology, Plant Science, Wageningen University,
RL   Binnenhaven 11, 6709 PD Wageningen, NETHERLANDS.
XX
RN   [2]
RA   Chen Y.K., Prins M., Goldbach R.;
RT   "Molecular cloning and nucleotide sequence of cucumber mosaic virus genomic
RT   RNA";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1118
FT                   /country="Netherlands"
FT                   /db_xref="taxon:12305"
FT                   /note="RNA3"
FT                   /virion
FT                   /organism="cucumber mosaic virus"
FT                   /strain="ALS"
FT                   /isolate="IPO-N11"
FT                   /specific_host="Alstroemeria"
FT                   /lab_host="Nicotiana benthamiana"
FT   CDS             141. .797
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAC81741.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLG
FT                   SRIQIRINPLPKFDSTVWVTVRKGPSSSDLSVAAISAMFGDGNSPGLVYQYAASGVKAT
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 1118 BP; 245 A; 272 C; 270 G; 331 T; 0 other;

AJ276587  Length: 1118  February 19, 2002 10:56  Type: N  Check: 2746  ..

       1  acatcatagt tttgaggttc aattcctttt gctccctgtt gggcccctta
      51  ctttctcatg gatgcttctc cgcgagttag cgtttagttg ttcacctgag
     101  tcgtgtgtgt tttgttttat tttcgcgtct tagtgtgcct atggacaaat
     151  ctggatctcc caatgctagt agaacctccc ggcgtcgtcg cccgcgtaga
     201  ggttctcggt ccgcttctgg tgcggatgca gggttgcgtg ctttgactca
     251  gcagatgctg agactcaata aaaccctcgc cattggtcgt cccactctta
     301  accacccaac cttcgtgggt agtgaaagct gtaaacccgg ttacactttc
     351  acatctatta ccctgaaacc gcctgaaatt gagaaaggtt catattttgg
     401  tagaaggttg tctttgccag attcagtcac ggactatgat aagaagcttg
     451  gttcgcgcat tcaaatcagg attaatcctt tgccgaaatt tgattctacc
     501  gtgtgggtta cagttcggaa aggaccttca tcatccgatc tttccgtcgc
     551  cgccatctct gctatgtttg gcgatggtaa ttcaccgggt ttggtttatc
     601  agtatgctgc gtccggagtt aaggccacca ataagttact ttatgacctg
     651  tccgagatgc gtgctgatat cggcgacatg cgtaagtacg ccgtcctggt
     701  ttactcgaaa gacgataaac tagagaagga cgagattgta cttcatgtcg
     751  acgtcgagca tcaacgaatt cctatctcac ggatgctccc gacttagtcc
     801  gtgtgtttac cggcgtccga agacgttaaa ctacactctc aatcgcgagt
     851  gctgagttgg tagtattgct ccaaactgcc tgaagtccct aaacgtgttg
     901  ttgcgcgggg aacgggttgt ccatccagct tacggctaaa atggtcagtc
     951  gtgtctttca cacgccgatg tcttacaaga tgtcgaggta cccttgaaat
    1001  catctcctag atttcttcgg aagggcttcg tgagaagctc gtgcacggta
    1051  atacactgat attaccaaga gtgcgggtat cgcctgtggt tttccacagg
    1101  ttctccataa ggagacca