Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, isolate Mg2 genomic RNA

ACC No: AJ279922

Dated: 2000-09-30 | Length: 720 | CRC: 109090964

                !!NA_SEQUENCE 1.0
ID   RYE279922  standard; RNA; VRL; 720 BP.
XX
AC   AJ279922;
XX
SV   AJ279922.1
XX
DT   30-SEP-2000 (Rel. 65, Created)
DT   30-SEP-2000 (Rel. 65, Last updated, Version 1)
XX
DE   Rice yellow mottle virus CP gene for coat protein, isolate Mg2 genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (20-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., LPRC, CIRAD/IRD, BP 5045, 34032 Montpellier cedex 1, FRANCE.
XX
RN   [3]
RA   Pinel A., N'Guessan P., Bousalem M., Fargette D.;
RT   "Molecular variability of geographically distinct isolates of Rice yellow
RT   mottle virus in Africa";
RL   Arch. Virol. 145:1621-1638(2000).
XX
DR   SPTREMBL; Q9DUQ4; Q9DUQ4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Madagascar"
FT                   /db_xref="taxon:31744"
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Mg2"
FT   CDS             1. .720
FT                   /db_xref="SPTREMBL:Q9DUQ4"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAC10426.1"
FT                   /translation="MARKGKKINSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRVSG
FT                   TVPGPLSSNTWPVHSVEFLMDFKRSATSADAVTFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DAVYLPEASADTAGSIEMCYLYDYADAIPSDTGKMSRTAGFVTSSVWYGAEGCHLLNGG
FT                   SARNAVVASMDCSRVGWRRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 157 A; 186 C; 216 G; 161 T; 0 other;

AJ279922  Length: 720  December 21, 2001 15:39  Type: N  Check: 8565  ..

       1  atggccagaa agggcaagaa aatcaactcc aaccaaggcc agcaaggcaa
      51  gaagaagagc cgacgtcctc gtgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcg tcccgggtat ctgggacggt tcctggacca
     151  ctatcttcta acacctggcc ggtccactcc gtggaattcc tgatggattt
     201  taagcggagt gccacatcgg cggatgcggt aacatttaat tgtgtgccgt
     251  ttaatctgcc tcgggtgtgg agtcttgcac gttgttactc gctgtggaag
     301  ccaacacggt gggatgcagt ctacctcccc gaggcgagcg cggatacagc
     351  tggaagtatt gagatgtgct atctctacga ctatgctgat gctatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg cggagggctg ccatttgttg aatggcggtt cagcacggaa
     501  tgccgtggtc gcctcgatgg attgctctcg agtcggctgg agacgcgtaa
     551  ctagttcaat tcctagtagc gtggatccca acgtcgtaaa taccatactg
     601  ccagcaaggc tagctgtgcg gtcgtcaatc aaaccgacgg tcgatgatgt
     651  gccggggaaa ctctatgcta tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga