Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, isolate Ma4 genomic RNA

ACC No: AJ279929

Dated: 2000-09-30 | Length: 720 | CRC: 1699582079

                !!NA_SEQUENCE 1.0
ID   RYE279929  standard; RNA; VRL; 720 BP.
XX
AC   AJ279929;
XX
SV   AJ279929.1
XX
DT   30-SEP-2000 (Rel. 65, Created)
DT   30-SEP-2000 (Rel. 65, Last updated, Version 1)
XX
DE   Rice yellow mottle virus CP gene for coat protein, isolate Ma4 genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (20-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., LPRC, CIRAD/IRD, BP 5045, 34032 Montpellier cedex 1, FRANCE.
XX
RN   [3]
RA   Pinel A., N'Guessan P., Bousalem M., Fargette D.;
RT   "Molecular variability of geographically distinct isolates of Rice yellow
RT   mottle virus in Africa";
RL   Arch. Virol. 145:1621-1638(2000).
XX
DR   SPTREMBL; Q9DUP9; Q9DUP9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Mali"
FT                   /db_xref="taxon:31744"
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ma4"
FT   CDS             1. .720
FT                   /db_xref="SPTREMBL:Q9DUP9"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAC10433.1"
FT                   /translation="MARKGKKINSSQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSNTWPLHSVEFLADFKRSATSADATTYDCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSAAAAGSIEMCFLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSKTDPNVVNTILPARLAVRSSIKPTVDDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 155 A; 198 C; 214 G; 153 T; 0 other;

AJ279929  Length: 720  December 21, 2001 15:39  Type: N  Check: 8079  ..

       1  atggccagga agggcaagaa aatcaactcc agccaggggc agcaaggaaa
      51  gaagaagagc cggcgcccac gtgggcgttc ggcggagcct cagcttcaac
     101  gggctccggt ggctcaggcc tcccggatat ctgggacggt tcctggtcca
     151  ctatcttcta acacctggcc gctccactcc gtggaattcc tagcggattt
     201  taagcggagt gccacctcgg cagatgcgac gacatacgat tgtgtgccgt
     251  tcaatctgcc tcgagtgtgg agtcttgcac gttgttactc catgtggaag
     301  ccaacacggt gggatgtcgt ttacctccct gaggtgagcg cggcggcagc
     351  tggaagtatc gagatgtgtt ttctctacga ctatgctgac accatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctccagcgtt
     451  tggtacggcg cggagggctg ccacttactg agtggcggct cagcacgaaa
     501  tgccgtggtc gcctcgatgg attgctcccg agtcggctgg aaacgtgtta
     551  ctagttccat tcctagtaaa acggatccca acgtcgtaaa caccatactg
     601  ccagctaggc tagctgtgcg gtcgtcgatc aaaccgacgg ttgatgatac
     651  gccggggaaa ctctacgcta tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga