Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus cp gene for coat protein, isolate Ca1 genomic RNA

ACC No: AJ306735

Dated: 2002-01-15 | Length: 720 | CRC: -1685539093

                !!NA_SEQUENCE 1.0
ID   RYE306735  standard; RNA; VRL; 720 BP.
XX
AC   AJ306735;
XX
SV   AJ306735.1
XX
DT   04-JAN-2002 (Rel. 70, Created)
DT   15-JAN-2002 (Rel. 70, Last updated, Version 2)
XX
DE   Rice yellow mottle virus cp gene for coat protein, isolate Ca1 genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.J.;
RT   ;
RL   Submitted (19-APR-2001) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D.J., UR Plant Resistance to Pests, IRD, BP 5045, 34032
RL   Montpellier cedex 1, 34032, FRANCE.
XX
RN   [2]
RA   Traore O., Pinel A., Fargette D., Konate G.;
RT   "First report and characterization of Rice yellow mottle virus in Central
RT   Africa";
RL   Plant Dis. 85:920-920(2001).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Cameroon"
FT                   /db_xref="taxon:31744"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ca1"
FT                   /specific_host="Oryza sativa"
FT   CDS             1. .720
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAC84715.1"
FT                   /translation="MARKGKKTNSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   MVPGPLSSNTWPLHSVEFLADFKRSSTSADATTYDCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSATVAGSIEMCFLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTVLPARLAVRSSIKPTVSDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 152 A; 192 C; 216 G; 160 T; 0 other;

AJ306735  Length: 720  January 22, 2002 15:33  Type: N  Check: 1356  ..

       1  atggccagga agggcaagaa aaccaactcc aaccaggggc agcaaggaaa
      51  gaagaagagc cggcgtccgc gtgggcgttc ggcggaaccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggatggt tcctggtcca
     151  ctatcttcta atacctggcc gctccactcc gttgagttcc ttgcggactt
     201  caagcggagt tccacatcgg cggatgcgac gacatacgat tgtgtgccgt
     251  ttaatttgcc tcgggtgtgg agtcttgcgc gttgttactc catgtggaag
     301  ccaacacggt gggatgtcgt ctaccttcct gaggttagtg cgacggttgc
     351  gggaagtatt gagatgtgtt ttctctacga ctacgctgac acaatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg cggagggctg ccacttattg agtggtggct cagcacgaaa
     501  tgccgtggtc gcctcgatgg actgttcccg agtcggctgg aaacgcgtta
     551  ctagttcaat ccctagtagc gtggatccca acgtcgtaaa caccgtgctg
     601  ccagcaaggc tagctgtgcg atcgtcgatc aaaccgacgg ttagcgatac
     651  gccggggaaa ctctacgcta tcgttagtat ggtcctgcgg gacccggttg
     701  atccaacact caatacgtga