Sequence of DPV Lily mottle virus
Lily mottle virus partial genomic RNA for polyprotein
ACC No: AJ310203
Dated: 2002-02-05 | Length: 2486 | CRC: 405549018
!!NA_SEQUENCE 1.0
ID TBR310203 standard; RNA; VRL; 2486 BP.
XX
AC AJ310203;
XX
SV AJ310203.1
XX
DT 05-FEB-2002 (Rel. 70, Created)
DT 05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE Lily mottle virus partial genomic RNA for polyprotein
XX
KW coat protein; NIb protein; ORF1; ORF2; ORF3; polyprotein.
XX
OS Lily mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-2486
RA Adams M.J.;
RT ;
RL Submitted (28-MAR-2001) to the EMBL/GenBank/DDBJ databases.
RL Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL AL5 2JQ, UNITED KINGDOM.
XX
RN [3]
RA Chen J., Chen J.P., Adams M.J.;
RT "Characterisation of some carla- and potyviruses from bulb crops in China";
RL Arch. Virol. 147:419-428(2002).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2486
FT /country="China:Zhejiang"
FT /db_xref="taxon:32624"
FT /virion
FT /organism="Lily mottle virus"
FT /isolate="Hangzhou"
FT /specific_host="Lilium sp."
FT CDS <1. .2281
FT /codon_start=2
FT /note="ORF1"
FT /product="polyprotein"
FT /protein_id="CAC84446.1"
FT /translation="GKGQLFETYLNVTPEAKEYFTPMMGAYQKSRLNKEAYIKDLFKYS
FT SPIVVGDVDCAAFEAACDSVTQLFESAGFGRCNYVTDEQEIFSALNMNAAVGAMYSGKK
FT RDYFKDFTDLDKESILRDSCLRLYQGKMGVWNGSLKAELRAKEKVDLNKTRTFTAAPVD
FT TLLGGKTCVDDFNNRFYSLNITCPWSVGMTKFYKGWDEMLRKLPEGWVYCDADGSQFDS
FT SLSPYLINAVLNLRLHFMEEWDVGAQMLQNLYTEIIYTPIATPDGTIIKKFKGNNSGQP
FT STVVDNTIMVILAIHYSYKYLKITKPLDEFCKYFVNGDDLLLAVAPEFEYLLDHFANTF
FT QQLGLNYDFSSRTKNREELWFMSHRGIMTDGLYIPKLEPERIVSILEWDRAVEPVHRLE
FT AICASMIEAWGYPQLLHEIRKFYYWVLEQAPYSELAQLGKAPYLSEVALRALYTGEATS
FT QEELERYLAALNLEGESGGAEIVAFQANETLNAGASSSTQTSRPTRPETAAVDVAPQQS
FT PEPRIRDRDVDAGTVGTFQIPRLKALATKISIPKIRGRTIVNLGHLVNYNPEQTDISNT
FT RSTQKQFETWYNAVKDEYGLNDESMALTMNGLMVWCIENGTSPNINGAWFMMDGDQQVE
FT FPLRPIIEHAKPTLRQIMAHFSHLAEAYIEKQNAEKPYMPRYGLQRNLTDFTLARFAFD
FT FYEVTSRTPARAKEAHFQMKTAALRGKQSKLFGLDGKVTTQDEDTERHTADDVNKNMHS
FT LLGISM"
FT mat_peptide <2. .1453
FT /note="ORF2"
FT /product="NIb protein"
FT mat_peptide 1454. .2278
FT /note="ORF3"
FT /product="coat protein"
FT 3'UTR 2282. .2486
XX
SQ Sequence 2486 BP; 722 A; 559 C; 619 G; 586 T; 0 other;
AJ310203 Length: 2486 February 12, 2002 17:24 Type: N Check: 5442 ..
1 ggggaagggc caacttttcg agacttacct gaatgttact cctgaggcga
51 aagagtactt cacgccaatg atgggtgcat accaaaagag ccggctaaac
101 aaagaagcat acattaagga tctgttcaaa tattcaagcc ctatagtggt
151 tggagacgtt gactgtgcag ccttcgaggc agcatgtgac agcgtgactc
201 agctgtttga gagtgctgga tttggcaggt gcaattatgt tactgacgag
251 caggagatct tttcggcgct gaacatgaac gctgctgttg gggccatgta
301 tagtggaaag aagcgtgact acttcaagga tttcacagac ctggacaagg
351 aaagcatcct tcgggacagc tgcctacgcc tataccaagg taagatggga
401 gtgtggaacg gctctttgaa agcggagttg cgagcaaagg agaaggtgga
451 ccttaacaaa acgcgaacct ttacagcggc gcctgtggat acactacttg
501 gtgggaaaac gtgcgtggac gactttaaca acaggtttta ttctttgaac
551 attacgtgtc cctggagcgt tggcatgaca aagttttaca aaggttggga
601 tgaaatgctg cgcaaattac ctgaagggtg ggtttattgc gatgctgatg
651 gatcacaatt cgacagctcg ttgtcaccct acctcataaa cgcagttttg
701 aatctacgac tacacttcat ggaggagtgg gacgtgggag cgcaaatgct
751 acagaacctg tatactgaaa taatatatac accgatagca acaccagatg
801 gcactataat aaagaaattc aaaggaaata atagtgggca gccttcaaca
851 gttgtcgaca acactatcat ggttatcctt gccatacatt actcatataa
901 atatctaaag ataacaaaac ctctggatga attctgtaag tactttgtta
951 atggtgatga cttattgctg gcagtggcgc ctgagttcga atacctattg
1001 gaccactttg cgaacacttt ccagcaatta gggctcaact atgacttctc
1051 gtccagaacc aaaaataggg aagaactgtg gttcatgtcg caccgtggaa
1101 tcatgacgga tggcttgtac ataccgaaac tcgaaccgga gcgcattgta
1151 tccatactgg aatgggacag agcggtggaa ccagtccaca ggctggaggc
1201 gatctgcgca tctatgattg aggcgtgggg atacccgcag ttgttgcatg
1251 aaatcagaaa gttctattac tgggtgctcg aacaagcccc ttattctgaa
1301 cttgcacaac tcggtaaagc tccatactta tcggaggtcg ctcttcgtgc
1351 gctgtacact ggtgaggcaa cgagccagga agagctcgaa cgctacttgg
1401 cagccttaaa cttagaaggt gaaagtggtg gcgcagagat tgtggcgttc
1451 caggcgaatg agacactcaa tgctggggcc tctagctcca cacaaacgag
1501 tcgcccaaca cgtccggaaa ctgccgcggt cgatgtagca ccacaacaga
1551 gccccgaacc aagaatacgc gatcgtgacg ttgatgctgg aaccgtggga
1601 acattccaaa ttccccgcct aaaggcattg gcgacaaaga ttagcattcc
1651 aaagattagg gggcggacaa tagtcaacct tgggcacctt gtgaattaca
1701 atccagagca aacagacatc tctaacacaa ggtcaaccca gaaacagttt
1751 gagacatggt acaacgccgt gaaagatgag tacggtctca atgatgagag
1801 catggcactg accatgaacg gtctgatggt ttggtgcatc gagaatggca
1851 cctcaccaaa cataaatggc gcgtggttca tgatggacgg agatcagcaa
1901 gttgaatttc cattacgtcc cataattgaa cacgcaaaac cgacgctgcg
1951 ccagatcatg gcgcatttct cacatctcgc tgaagcatat attgagaaac
2001 aaaatgcaga aaaaccgtac atgcctaggt acggccttca gcgaaatctc
2051 accgatttca cgctagcacg attcgctttc gatttctatg aagttacttc
2101 acgcacgccc gcgcgagcga aggaagcaca cttccagatg aaaacagccg
2151 ccttgcgcgg aaaacaatcg aagctatttg ggttagatgg aaaggtgacc
2201 acccaagatg aggacacgga gaggcataca gcagatgatg tcaataaaaa
2251 catgcactcc ttacttggaa tttctatgta aatcctcgaa taaacagcac
2301 tagtaacttg ctaatatatc tatctcgttt attccgtagt atcctatctt
2351 ttagcccaac tctttgtgct atagagtggt ttaccatgaa cgcacatcgt
2401 agttgggaac cgagctcctt gttagtgtct agctgcagag aggttttcct
2451 cgcgtcttct tagccactag tcttggaaga agggac