Sequence of DPV Mungbean yellow mosaic India virus
Mungbean yellow mosaic India virus-[SoybeanTN] complete genome
ACC No: AJ416349
Dated: 2005-04-15 | Length: 2747 | CRC: -1861592681
!!NA_SEQUENCE 1.0
ID SYE416349 standard; circular genomic DNA; VRL; 2747 BP.
XX
AC AJ416349;
XX
SV AJ416349.1
XX
DT 13-OCT-2001 (Rel. 69, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Mungbean yellow mosaic India virus-[SoybeanTN] complete genome
XX
KW AC1 gene; AC2 gene; AC2 protein; AC3 gene; AC3 protein; ac4 gene;
KW AC4 protein; ac5 gene; AC5 protein; AV1 gene; AV2 gene; coat protein;
KW pre-coat protein; replication initiator protein.
XX
OS Mungbean yellow mosaic India virus-[SoybeanTN]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2747
RA Usha R.;
RT ;
RL Submitted (09-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL Usha R., Plant Biotechnology, Madurai Kamaraj University, School of
RL Biotechnology, Madurai, Tamil Nadu, 625021, INDIA.
XX
RN [2]
RX DOI; 10.1016/j.virusres.2004.09.006.
RX PUBMED; 15681067.
RA Girish K.R., Usha R.;
RT "Molecular characterization of two soybean-infecting begomoviruses from
RT India and evidence for recombination among legume-infecting begomoviruses
RT from South-East Asia.";
RL Virus Res. 108(1-2):167-176(2005).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2747
FT /country="India:Jabalpur, Madhya Pradesh"
FT /db_xref="taxon:223292"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Mungbean yellow mosaic India virus-[SoybeanTN]"
FT /isolation_source="infected leaves"
FT CDS 156. .497
FT /db_xref="InterPro:IPR002511"
FT /db_xref="UniProt/TrEMBL:Q910Z1"
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="CAC94872.1"
FT /translation="MWDPLLNDFPKSLHGFRCMLAIKYLQQVQENYPSNSLGFSYLTGL
FT IQVLRIRNHAKADLRYCILYPDIECTEEIELRYPAHAPCFCGRCPYQHEEKTLDQPSHV
FT EETSVLPTV"
FT CDS 316. .1089
FT /db_xref="GOA:Q910Z0"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q910Z0"
FT /gene="AV1"
FT /product="coat protein"
FT /function="encapsidation"
FT /protein_id="CAC94873.1"
FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLMLPASAGGVPTNMKRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITH
FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVLRKFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
FT CDS complement(733. .984)
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProt/TrEMBL:Q910U4"
FT /gene="ac5"
FT /product="AC5 protein"
FT /protein_id="CAC94874.1"
FT /translation="MVLILRCLLVVVNNIIINFEKTIHHGLFLTSILATSNSGIKLSQD
FT LITITQIVLHSSCTWLVVIHVKNLTKIHGCTKWSSVTT"
FT CDS complement(1086. .1490)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q910Y9"
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="CAC94875.1"
FT /translation="MDFRTGESITATQLRNGVYTWEVQNPLSFKIMHHSPIRAGSRMIV
FT TKLRIMFNHGLKKALGMHKCFLELKLFHYLTATSGMILSIFSRQLFKFLNNLGVISLAN
FT ILYFASDFLYNKLHLVEDVSFTHNVQYKLY"
FT CDS complement(1228. .1680)
FT /db_xref="GOA:Q910Y8"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q910Y8"
FT /gene="AC2"
FT /product="AC2 protein"
FT /function="trans-activation"
FT /protein_id="CAC94876.1"
FT /translation="MKRTMLRLNSGLQRMRSSTPSRNHCSPPSIKVQHRVAKKRAIRRS
FT RIDLKCGCSYYIHINCRNYGFSHRGEHHCNSTQEWRLYLGGAKSPLFQDHAPQSDSSRV
FT QNDSNQAPHNVQPRVEESTGDAQVLPGIEALPLFDGDFWDDLIDLQ"
FT CDS complement(1538. .2626)
FT /db_xref="GOA:Q910Y7"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q910Y7"
FT /gene="AC1"
FT /product="replication initiator protein"
FT /function="replication initiation"
FT /protein_id="CAC94877.1"
FT /translation="MPRDGRFAINAKNYFLTYPKCPLTKEDALEQLLALSTPVNKKFIR
FT ICRELHEDGQPHLHVLLQFEGKQQTKNQRFFDLHSRCRSAYYHPNIQAAKSCSDVKTYM
FT EKDGDILDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH
FT NLNCNLSRIFTEPVQAYVSPFTLESFDKVPSYISSWAERNVRDPAARPDRPISIVIEGD
FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL
FT FSSVNQGSTQGRQEESNSTISN"
FT CDS complement(2176. .2475)
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q910Y6"
FT /gene="ac4"
FT /product="AC4 protein"
FT /protein_id="CAC94878.1"
FT /translation="MKMDSLISMFCFSSKGNNKRKTKGSSTSIPDADRHITIRTFRQLK
FT AAQMLKHTWRKTETFLIMEPSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY"
XX
SQ Sequence 2747 BP; 732 A; 580 C; 611 G; 824 T; 0 other;
AJ416349 Length: 2747 April 19, 2005 08:55 Type: N Check: 6209 ..
1 acctgagtgc cccgcgaccg gtgtattggg tttcctttaa cttttctact
51 ttttgggtac ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc
101 tatgttaatt caaatttgaa ttataaagca agtgcacact ctgaacccac
151 taacaatgtg ggatccattg ttgaacgact ttcccaaatc actgcatgga
201 ttccggtgca tgttggcaat aaagtatttg cagcaagttc aagagaatta
251 tccttctaat tctcttggtt tctcatatct tacagggtta attcaggtat
301 tgcgcatccg gaatcatgcc aaagcggacc tacgatactg cattctctac
351 cccgatatcg aatgcacgga ggagattgaa cttcgatacc ccgctcatgc
401 tccctgcttc tgcgggaggt gtccctacca acatgaagag aagacgttgg
451 accaaccgtc ccatgtggag gaaacctcgg ttttaccgac tgtataggtc
501 ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt caatcatttg
551 agcagaggca tgatattgcc cacacaggca aagtgatttg catatcggac
601 gtgactagag gtaatggaat tacacatcgt attggcaaac gtttttgcat
651 caagtccgtg tacattactg ggaaggtttg gatggacgaa aacattaagt
701 ccaaaaatca cacgaacact gtgatgttca agttatgtcg tgacagacga
751 ccatttggta cacccatgga ttttggtcaa gtttttaaca tgtatgacaa
801 cgagccaagt acagctactg tgaagaacga tctgcgtgat cgttatcaag
851 tcttgcgaaa gtttaatgcc actgttactg gtggccaata tgcttgtaag
901 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta
951 caaccaccag gaggcagcga agtatgagaa ccatactgag aacgcattat
1001 tattgtatat ggcatgtact catgcctcaa atcctgtgta tgcaacactt
1051 aaaattcgga tctattttta cgattcgata ttgaattaat aaagtttgta
1101 ttgaacatta tgcgtaaagc ttacatcctc cactaggtgg agtttattgt
1151 acaggaaatc cgacgcgaaa tataaaatat ttgctaagct aatgactcct
1201 aaattattta gaaacttaaa taattgtcta ctgaagatcg ataagatcat
1251 cccagaagtc gccgtcaaat agtggaagag cttcaattcc aggaagcact
1301 tgtgcatccc cagtgctttc ttcaacccgt ggttgaacat tatgcggagc
1351 ttggttacta tcattctgga ccctgctcga atcggactgt ggtgcatgat
1401 cttgaaagag aggggatttt gcacctccca ggtatagacg ccattcctga
1451 gttgagttgc agtgatgctc tcccctgtgc gaaaatccat agttacggca
1501 gttgatatgg atgtaatagc tacacccaca cttcaggtca attcgagatc
1551 gtcgaattgc tctcttcttg gcgaccctgt gttgaacctt gattgacgga
1601 ggagaacagt ggttccttga gggtgtagaa ctccgcattc tttgaagccc
1651 actgtttaag cgcagcattg ttctcttcat ccaagtactc tttataggag
1701 gacttgggac cagggttaca cagaaagatg gtggggatac cacctttaat
1751 tttagtgggc ttcccgtact tgacgttaga ctgccagtct ctttgcgcgc
1801 ccatgaattc tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg
1851 acgttgtacc atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg
1901 gccgcaaaga taattatgag gacctatggc acgtgcccac atggttttac
1951 ccgtgcgact atctccttca ataacgatac taataggtct atctggccgc
2001 gcagcgggat ctctcacatt tctttcagcc catgaagaaa tgtagctggg
2051 aaccttgtcg aatgactcca gtgtaaaagg cgacacatat gcctgaacag
2101 gctctgtgaa tatccgagac aaattacaat ttaaattatg aaattgtaaa
2151 ataaaatcct taggagcctt ttcttttaat ataaggaggg cctccaactt
2201 tgatccagag ttgagtgcct cggcgtatgc gtcgttggca gattgtttac
2251 ctcctctagc tgatcggcca tcgatttgga aggttccatg atcaagaatg
2301 tctccgtctt tctccatgta tgttttaaca tctgagcagc ttttagctgc
2351 ctgaatgttc ggatggtaat atgccgatcg gcatctggaa tggaggtcga
2401 agaacctttg gtttttcgtt tgttgtttcc cttcgaactg aagcagaaca
2451 tggagatgag gctgtccatc ttcatggagt tcacgacaga tgcggatgaa
2501 tttcttgtta acaggtgttg acaaggctag tagttgttca agagcgtcct
2551 cctttgtaag aggacatttg ggatatgtca agaaatagtt ttttgcgtta
2601 atagcaaaac gaccatccct tggcattttt aaagtcgttt tggtatcggt
2651 gtacaccgat tgccttctct agccccctat cggtgtatcg gtgtactata
2701 tatactagag ctactaaaag cctctagggg cactcagcta taatatt