Sequence of DPV Olive latent virus 2

Olive latent virus 2 partial MP gene for movement protein and CP gene for capsid protein, genomic RNA

ACC No: AJ439450

Dated: 2002-06-03 | Length: 1696 | CRC: -327966021

                !!NA_SEQUENCE 1.0
ID   OLA439450  standard; RNA; VRL; 1696 BP.
XX
AC   AJ439450;
XX
SV   AJ439450.1
XX
DT   21-MAR-2002 (Rel. 71, Created)
DT   03-JUN-2002 (Rel. 72, Last updated, Version 3)
XX
DE   Olive latent virus 2 partial MP gene for movement protein and CP gene for
DE   capsid protein, genomic RNA
XX
KW   capsid protein; CP gene; movement protein; MP gene.
XX
OS   Olive latent virus 2
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Oleavirus.
XX
RN   [1]
RP   1-1696
RA   Grieco F.;
RT   ;
RL   Submitted (15-MAR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Grieco F., Sezione di Bari, C.N.R. Istituto di Virologia Vegetale, via
RL   Amendola n.165/A - BARI, ITALY 70126, ITALY.
XX
RN   [2]
RA   Grieco F., Parrella G., Vovlas C.;
RT   "Characterisation of a Olive latent virus 2 isolate from castor-bean
RT   (Ricinus communis L.)";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1696
FT                   /country="Greece"
FT                   /db_xref="taxon:33773"
FT                   /virion
FT                   /organism="Olive latent virus 2"
FT                   /strain="Castor bean"
FT                   /specific_host="Ricinus communis"
FT                   /lab_host="Nicotiana occidentalis"
FT   CDS             1. .1014
FT                   /evidence=EXPERIMENTAL
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /function="essential for viral cell-to-cell movement"
FT                   /protein_id="CAD28565.1"
FT                   /translation="MAGLWRSNSTLDVERGRNRTQTETVQTAPRQAQGILELLNSPAAR
FT                   EALQGSDFARWRGVPVSPAGGYFELAPLRSVNNFARGLRSVFGGSTSKREAYIPQHGFY
FT                   RLNYVLVAVVPHVEHSDPGEVTVQLVENTNPTRAVDGQELTARLADGTFVFAAAPTYDI
FT                   VLEQASMLVEGEPAGVVQRMFGIRTSVMGSLTTGSAVSIYPIWSAEFPIQGATFNYVAP
FT                   SIVHIDRFNRSVATEIDVLRRRFSLMRPLRTARSRESFQVGRMSLDVARPSVVRPPPVD
FT                   PQAEGGIHVNSPTSEQSQGEDRVPRAGLASGTSVGEGANHEFISGAVKSTAPVRQI"
FT   CDS             1086. .1634
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /function="essential for virion formation"
FT                   /protein_id="CAD28566.1"
FT                   /translation="MSSAAQPMSRRARRRAARRVPGSQPGTSGGMVIPMSFVVNGATTT
FT                   DFVTYHSLYSRLAAYNGDLWIRRVAVRVTGSVAKRMGKYAFFEGLAVDKSQILSAAHAR
FT                   PYVYGLPSTLSLPGGRRQVKDFQSINLFFLLDGAAHAGEFAAGTFYFEFEGSPNVDFPR
FT                   DSEGSNQAVEKFYLEHINA"
XX
SQ   Sequence 1696 BP; 356 A; 402 C; 471 G; 467 T; 0 other;

  AJ439450  Length: 1696  June 18, 2002 10:22  Type: N  Check: 77  ..

       1  atggctggtt tgtggcgttc taactccact ctcgatgtcg agcggggacg
      51  aaatcgtacc caaactgaga cagtccaaac tgcccctcga caggcgcaag
     101  gcattttaga gttactcaat tccccagcag cgcgggaggc gcttcagggt
     151  tcagacttcg cgcgttggcg cggagttcca gtgtcccctg ctggtggcta
     201  cttcgagctt gctcctctta ggagcgtgaa taattttgcg agaggcctcc
     251  gttcagtttt cggaggttct acatctaaaa gagaagccta tattcctcaa
     301  catgggtttt atcggttgaa ctatgtgtta gtcgccgtgg ttcctcatgt
     351  ggagcattcc gacccgggtg aagtgacggt gcaattagtt gaaaatacta
     401  atcccactcg tgcggtcgat ggtcaagagc taacagcccg tttagcagat
     451  ggtacatttg tatttgctgc ggctcctacc tatgatatag tgcttgagca
     501  agcttcgatg cttgttgaag gagaacctgc tggtgtagtg caacgtatgt
     551  ttggcatacg tacgtcagtg atggggtcac tcacaactgg atctgcggtg
     601  tctatatacc cgatctggtc ggccgagttt cctatacaag gtgctacttt
     651  taattacgta gccccttcca ttgtgcacat cgacaggttc aaccgttctg
     701  tggctactga gatagatgtg ttgcgtcgga ggttttctct gatgcgaccg
     751  ttacgtacag ccagatcgcg tgaatccttc caagttggta gaatgagtct
     801  cgatgtcgcg agaccgagtg ttgttagacc tccccctgtt gatccacagg
     851  cggagggtgg tatccatgtg aattccccta cttctgaaca gagtcagggt
     901  gaggatcgtg ttccccgagc cgggttggct agcggtacta gtgttggtga
     951  aggtgcgaat catgaattca tatctggagc ggttaagagc accgctccgg
    1001  tgcgtcaaat ataataccac actaagtgcg gcatcggtgc atattctttc
    1051  tgattgactg ttaaattctg aaaaggaagg aagaaatgtc ttcagcagct
    1101  caaccgatgt cccgccgcgc tcgcagacga gctgctcggc gtgtcccggg
    1151  ttctcaaccg ggaacgtctg gaggtatggt gatccccatg tcgttcgtag
    1201  tgaacggagc gacgaccacc gactttgtga cttatcatag tctttatagt
    1251  cggttggccg catataatgg cgatttgtgg atccgacgtg tagccgtccg
    1301  tgtgactggc tccgtcgcta agcgtatggg taaatacgcc ttttttgagg
    1351  gtctggcggt ggacaaatct caaattctgt ctgccgcgca tgcgcgtcct
    1401  tacgtgtacg gcctcccatc tacgcttagc ctccccggag ggagaaggca
    1451  ggtgaaagac tttcagtcca ttaacctgtt tttccttcta gatggtgctg
    1501  cccatgccgg cgagtttgcc gctggtacgt tttatttcga gtttgaggga
    1551  tcccctaatg tggatttccc tcgagattct gagggcagta atcaggcggt
    1601  agagaagttt tatctagagc atattaatgc ttagccgccg ggagggccaa
    1651  ctcactgaaa gttgacggtc agtgcgttac ttgagagttc gtcttg