Sequence of DPV Cotton leaf curl Multan virus
Cotton leaf curl Multan virus-[Faisalabad2] complete sequence, isolate 31cf
ACC No: AJ496287
Dated: 2005-04-15 | Length: 2750 | CRC: 1332449617
!!NA_SEQUENCE 1.0
ID CLE496287 standard; circular genomic DNA; VRL; 2750 BP.
XX
AC AJ496287;
XX
SV AJ496287.1
XX
DT 22-JUL-2002 (Rel. 72, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Cotton leaf curl Multan virus-[Faisalabad2] complete sequence, isolate 31cf
XX
KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV2 gene; coat protein;
KW complete genome; precoat protein; Rep protein;
KW replication enhancer protein; transcriptional activator protein;
KW transcriptional regulator protein.
XX
OS Cotton leaf curl Multan virus-[Faisalabad2]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2750
RA Fauquet C.M.;
RT ;
RL Submitted (20-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL Fauquet C.M., Iltab, Danforth Plant Science Center, 975 North Warson Road,
RL St Louis, Missouri, MO 63132, USA.
XX
RN [2]
RX DOI; 10.1007/s00705-003-0149-y.
RX PUBMED; 14551819.
RA Mansoor S., Briddon R., Bull S., Bedford I.D., Bashir A., Hussain M.,
RA Saeed Z.M.Y., Malik K.A., Fauquet C., Markham P.G.;
RT "Cotton leaf curl disease is associated with multiple monopartite
RT begomoviruses supported by single DNA beta";
RL Arch. Virol. 148(10):1969-1986(2003).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2750
FT /country="Pakistan"
FT /db_xref="taxon:223255"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Cotton leaf curl Multan virus-[Faisalabad2]"
FT /isolate="31cf"
FT /specific_host="Gossypium hirsutum"
FT CDS 117. .428
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q8JJE7"
FT /product="precoat protein"
FT /gene="AV2"
FT /protein_id="CAD42826.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAHV"
FT CDS 277. .1047
FT /db_xref="GOA:Q8JLK9"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8JLK9"
FT /product="coat protein"
FT /gene="AV2"
FT /protein_id="CAD42827.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMYRKPRMYRMYRGPDVPKGCEGPCKEQSLESRHDVVHIGKVMCISDVTRGVGWTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDKQP
FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT CDS complement(1050. .1454)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q8JLK8"
FT /product="replication enhancer protein"
FT /gene="AC3"
FT /protein_id="CAD42828.1"
FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI
FT LTIRIQFNYNTRKAMGLHKCFLTFGIWTTLQPQTGLFLRVFKTQVFKYLNNLGVISINL
FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY"
FT CDS complement(1147. .1599)
FT /db_xref="GOA:Q8JLK7"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q8JLK7"
FT /product="transcriptional activator protein"
FT /gene="AC2"
FT /protein_id="CAD42829.1"
FT /translation="MRSSSLSKDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN
FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQLQH
FT SESYGTAQVFSNLRNLDDLTASDWSFLKGIQNPSLQISEQSRCNFN"
FT CDS complement(1496. .2587)
FT /db_xref="GOA:Q8JLK6"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8JLK6"
FT /product="Rep protein"
FT /gene="AC1"
FT /protein_id="CAD42830.1"
FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK
FT ICRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH
FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDPAARPLRPRSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLEGPL
FT YSGTNQSTAQGSEETQQEEESRS"
FT CDS complement(2128. .2430)
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8JLK5"
FT /product="transcriptional regulator protein"
FT /gene="AC4"
FT /protein_id="CAD42831.1"
FT /translation="MGALISMCSSSSRVNSYARITDSSTWYPQPDQHISIRTFRELNQA
FT QMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLTPQHLTQEVSQRLLESLRN"
XX
SQ Sequence 2750 BP; 699 A; 550 C; 652 G; 849 T; 0 other;
AJ496287 Length: 2750 April 19, 2005 08:53 Type: N Check: 5574 ..
1 accggatggc cgcgcgattt tttatgtggg cccccgagtt atgagattgc
51 tccctcaaag ctaaataacg ctcccgccca ctataagtac ttgcgcacta
101 agtttcaaat tcaaacatgt gggatccatt gttaaacgaa tttcctgata
151 cggtgcacgg gtttcggtgt atgctttctg tgaaatatct gcaactttta
201 tcgcaggatt attcaccgga taccctaggt tacgagttaa tacgggattt
251 aatctgtatt ctacgttccc gtaattatgt cgaagcgagc tgcagatatc
301 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag
351 cccatacacc agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac
401 aggcatggac aaacaggccc atgtatagga agcccagaat gtatcggatg
451 tacagaggtc cggatgttcc aaagggttgt gaaggcccat gtaaggaaca
501 atctttggag tccagacatg atgttgttca tattggtaag gtaatgtgta
551 tttctgatgt tactcgtggt gtcggttgga cccatcgtat tggtaaacgt
601 ttttgtgtca agtcagttta tgttttaggt aagatatgga tggatgaaaa
651 tattaagacc aagaatcata cgaattcggt gatgttcttt ttagtccgcg
701 atcgacgtcc tgttgacaaa cctcaggatt ttggtgaggt attcaatatg
751 tttgacaagc aacccagtac agcaactgtg aagaatagtc atagggaccg
801 ttaccaggtg ttgaggaaat ggcatgcaac cgttacgggt ggtcaatatg
851 catcgaagga acaagctttg gtcaagaagt ttgtcagagt taacaattat
901 gttgtttaca atcaacagga agcagggaaa tacgagaatc atacggaaaa
951 tgcgttaatg ctttatatgg cttgtactca cgctagcaac cctgtttatg
1001 ctacgttgaa gattaggata tatttttatg actctgtaac gaattgatat
1051 taataaagtt tgaattttat ttctgaatat tgatctacat acatagtttg
1101 ttggattaca ttgtacaata catgttctac agctttaata actaaattaa
1151 ttgaaattac accgagattg ttcagatatt tgaagacttg ggttttgaat
1201 acccttaaga aaagaccagt ctgaggctgt aaggtcgtcc agattccgaa
1251 ggttagaaaa cacttgtgca gtcccatagc tttccgagtg ttgtagttga
1301 actggatcct gatcgtgagt atatccatat tcgtcgtgaa tggacggttg
1351 acgtggctga tgatcttgaa atagagggga tttggaacct cccagatata
1401 tgcgccattc cctgcttgag ctgcagtgat gggttcccct gtgcgtgaat
1451 ccatggttgt ggcagttgat tgacagataa taagaacacc cgcattcaag
1501 atctactctc ctcctcctgt tgcgtctctt cgcttccctg tgctgtactt
1551 tgattggtac ctgagtacag gggtccttcg agagtgatga agatcgcatt
1601 cttcactgcc cagtttttta gtgcggtgtt cttttcctcg tctaggaatt
1651 ctttataact gctgttggga ccaggattgc agaggaagat tgttggtatc
1701 ccgcctttaa tttgaactgg cttcccgtac tttgtgttgg attgccagtc
1751 cctttgggcc cccatgaact ctttaaagtg tttgaggaaa tgcgggtcga
1801 cgtcatcaat gacgttatac caggcgtcgt tactgtagac cttgggactc
1851 agatccagat gtccgcacaa atagttatgt ggtcccagtg atctagccca
1901 catcgtcttt cccgttcgac tatctccttc aattactata cttcgaggtc
1951 taaggggccg cgcagcggga tcgacaacgt tatcgatggc ccaaacttca
2001 agttcttctg gaacttgatc gaaagaagaa ggagaaaaag gagaaatata
2051 gggagccggt ggctcctgaa agattctgtc tagatttgca tttaaattat
2101 gaaattgtag tacaaaatct ttaggagcta gttccttaat gactctaaga
2151 gcctctgact tacttcctgc gttaagtgct gcggcgtaag cgtcgttggc
2201 tgtctgctgt cctcctcttg ctgatcttcc atcgatctga aactctcccc
2251 actcgagagt gtccccgtcc ttgtcgatgt aggccttgac atctgagctt
2301 gatttagctc cctgaatgtt cggatggaaa tgtgctgatc tggttgggga
2351 taccaggtcg aagaatctgt tattcgtgca tacgaattta ccctcgaact
2401 ggatgagcac atggagatga gggctcccat cttcgtgtaa ctctctgcag
2451 attttgatgt attttttatt cgagggtgtg ttgatggctt gaatttggga
2501 aagtgcttcc tctttagtga gtgagcactg tggataagtg atgaaataat
2551 ttttggcttg tactttaaaa cgtttggggg gagccattga ctttggtcaa
2601 ttggagacaa ctgatgggct tttactctgg gaattggaga ctggatacaa
2651 tttatagtgt ctccaaatgg catattctgt aaataactag aagttcgttt
2701 gaaatttaaa ttcccctttg gactccaaaa gcggccatcc gtttaatatt