Sequence of DPV Potato virus Y

Potato virus Y partial gene for polyprotein, genomic RNA, isolate CAA16

ACC No: AJ507381

Dated: 2003-01-06 | Length: 564 | CRC: -1839730219

                !!NA_SEQUENCE 1.0
ID   PVI507381  standard; RNA; VRL; 564 BP.
XX
AC   AJ507381;
XX
SV   AJ507381.1
XX
DT   06-JAN-2003 (Rel. 74, Created)
DT   06-JAN-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, genomic RNA, isolate CAA16
XX
KW   genome-linked viral protein; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-564
RA   Moury B.;
RT   ;
RL   Submitted (04-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   Moury B., Plant Pathology, Institut National Recherche Agronomique, Domaine
RL   St Maurice, BP94, F-84143 Montfavet cedex, FRANCE.
XX
RN   [2]
RA   Moury B., Morel C., Johansen E., Guilbaud L., Souche S., Caranta C.,
RA   Jacquemond M.;
RT   "Mutations in the Potato virus Y genome-linked protein determine virulence
RT   towards monogenic recessive resistances both in Capsicum annuum and
RT   Lycopersicon hirsutum.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .564
FT                   /country="Italy:Sicily"
FT                   /db_xref="taxon:12216"
FT                   /virion
FT                   /organism="Potato virus Y"
FT                   /isolate="CAA16"
FT                   /isolation_source="infected pepper crops"
FT                   /lab_host="Nicotiana tabacum"
FT   CDS             <1. .>564
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAD45550.1"
FT                   /translation="GKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKGK
FT                   GKGTTVGMGKSSRRFINMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDVQERFGEVR
FT                   RKMIEDDEIQRQVLDSNTTIHAYFRKDWSDKALKIDLMPHNPLKVCDKTNGIAKFPERE
FT                   RELRQTGPAVEVDVKDIPKQEVEHE"
FT   mat_peptide     1. .564
FT                   /product="genome-linked viral protein"
XX
SQ   Sequence 564 BP; 209 A; 96 C; 137 G; 122 T; 0 other;

AJ507381  Length: 564  January 14, 2003 16:45  Type: N  Check: 1119  ..

       1  gggaagaata aatctaaaag aattcaagct ttaaaatttc gtcatgctcg
      51  cgacaaaagg gctggcttcg aaattgacaa caatgatgac acaatagagg
     101  aattctttgg atctgcatac aggaagaaag gaaaaggtaa aggtaccaca
     151  gttggcatgg gcaagtcaag taggaggttc ataaacatgt atgggttcga
     201  tccaacagag tactcattca tccaattcgt tgatccactc actggagcac
     251  aaatagaaga gaatgtctat gctgacatta gagacgttca agaaagattt
     301  ggtgaagtgc gaaggaagat gattgaagat gatgaaatac aaaggcaagt
     351  attggatagt aacacgacca tacatgctta cttcaggaaa gattggtctg
     401  ataaagcctt gaagatcgac ttaatgccac ataacccact taaagtttgt
     451  gacaaaacaa atggcatcgc caaatttcct gagagagagc gtgaactgag
     501  gcagaccgga ccagcagtag aagtcgacgt aaaggacata ccaaagcagg
     551  aggtagagca tgaa