Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus mRNA for coat protein (CP gene), isolate Tz4

ACC No: AJ511793

Dated: 2003-03-04 | Length: 720 | CRC: -1278846010

                !!NA_SEQUENCE 1.0
ID   RYE511793  standard; RNA; VRL; 720 BP.
XX
AC   AJ511793;
XX
SV   AJ511793.1
XX
DT   04-MAR-2003 (Rel. 75, Created)
DT   04-MAR-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Rice yellow mottle virus mRNA for coat protein (CP gene), isolate Tz4
XX
KW   coat protein; CP gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (14-OCT-2002) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., DGPC, IRD, BP 64501, 34394 Montpellier cedex 5, FRANCE.
XX
RN   [2]
RA   Abubakar Z., Ali F., Pinel A., Traore O., Guessan P.N., Notteghem J.L.,
RA   Kimmins F., Konate G., Fargette D.;
RT   "Phylogeography of Rice yellow mottle virus in Africa";
RL   J. Gen. Virol. 84(3):733-743(2003).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz4"
FT   CDS             1. .720
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAD54283.1"
FT                   /translation="MARKGKKISSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSSSWPVHSVEFLMDFKRSATSAEATTFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVIYLPEVSAATAGSIEMCYLYDYADAIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   TARNAVVASMDCSRVGWRRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 154 A; 189 C; 216 G; 161 T; 0 other;

 AJ511793  Length: 720  March 11, 2003 12:02  Type: N  Check: 1138  ..

       1  atggccagga agggcaagaa aatcagctcc aaccagggtc agcaaggaaa
      51  gaagaagagt cggcgtcccc gtgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggtcca
     151  ctatcttcta gctcctggcc ggtccactcc gtggaattcc taatggattt
     201  taagcggagt gccacatcgg cagaagcgac gacattcaac tgtgtgccgt
     251  ttaatctgcc tcgggtgtgg agtcttgcgc gttgttactc actgtggaag
     301  ccaacacggt gggatgttat ctacctccct gaggttagtg cggcgacagc
     351  tggaagtatt gagatgtgct atctctacga ctatgctgac gccattccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg ctgagggctg ccacttgttg agtggcggca cagcacggaa
     501  tgccgtggtc gcctcgatgg attgctctcg agtcggctgg agacgcgtta
     551  ctagttcaat acctagtagt gtggatccca acgtcgtaaa caccatactg
     601  ccagcaaggc tagctgtgcg gtcgtcgatc aaaccgacgg ttgatgatgt
     651  gccagggaaa ctctacgcca tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga