Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus mRNA for coat protein (CP gene), isolate Tz14

ACC No: AJ511803

Dated: 2003-03-04 | Length: 720 | CRC: -631076050

                !!NA_SEQUENCE 1.0
ID   RYE511803  standard; RNA; VRL; 720 BP.
XX
AC   AJ511803;
XX
SV   AJ511803.1
XX
DT   04-MAR-2003 (Rel. 75, Created)
DT   04-MAR-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Rice yellow mottle virus mRNA for coat protein (CP gene), isolate Tz14
XX
KW   coat protein; CP gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (14-OCT-2002) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., DGPC, IRD, BP 64501, 34394 Montpellier cedex 5, FRANCE.
XX
RN   [2]
RA   Abubakar Z., Ali F., Pinel A., Traore O., Guessan P.N., Notteghem J.L.,
RA   Kimmins F., Konate G., Fargette D.;
RT   "Phylogeography of Rice yellow mottle virus in Africa";
RL   J. Gen. Virol. 84(3):733-743(2003).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz14"
FT   CDS             1. .720
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAD54293.1"
FT                   /translation="MARKGKKISSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSSSWPVHSVEFLMDFKRSATSAEATTFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVIYLPEVSAATAGSIEMCYLYDYADAIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   TARNAVVASMDCSRVGWRRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 155 A; 190 C; 217 G; 158 T; 0 other;

 AJ511803  Length: 720  March 11, 2003 12:02  Type: N  Check: 9102  ..

       1  atggccagga agggcaagaa aatcagctcc aaccagggcc agcaaggaaa
      51  gaagaagagt cggcgtcccc gtgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggtcca
     151  ctatcttcta gctcctggcc ggtccactcc gtggaattcc taatggattt
     201  taagcggagt gccacatcgg cagaagcgac gacattcaac tgcgtgccgt
     251  ttaatctgcc tagggtgtgg agtcttgcgc gttgttactc actgtggaag
     301  ccaacacggt gggatgtcat ctacctccct gaggttagtg cggcgacagc
     351  tggaagtatt gagatgtgtt atctctacga ctatgctgac gccattccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg ctgagggctg ccatttgttg agtggcggca cagcacgaaa
     501  tgccgtggtc gcctcgatgg attgctcgcg agtcggctgg agacgcgtta
     551  ctagttcaat acctagtagc gtggatccca acgtcgtaaa caccatactg
     601  ccagcaaggc tagctgtgcg gtcgtcgatc aaaccgacgg ttgatgatgt
     651  gccggggaaa ctctacgcca tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga