Sequence of DPV Tobacco leaf curl Yunnan virus
Tobacco leaf curl Yunnan virus - [Y143] complete genome, isolate Y143
ACC No: AJ512762
Dated: 2005-04-15 | Length: 2750 | CRC: 1538090068
!!NA_SEQUENCE 1.0
ID TLE512762 standard; circular genomic DNA; VRL; 2750 BP.
XX
AC AJ512762;
XX
SV AJ512762.1
XX
DT 25-OCT-2002 (Rel. 73, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE Tobacco leaf curl Yunnan virus - [Y143] complete genome, isolate Y143
XX
KW AC1 gene; AC2 gene; AC2 protein; AC3 gene; AC3 protein; AC4 gene;
KW AC4 protein; AV1 gene; AV2 gene; AV2 protein; coat protein; Rep protein.
XX
OS Tobacco leaf curl Yunnan virus - [Y143]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2750
RA Zhou X.;
RT ;
RL Submitted (21-OCT-2002) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road
RL 268,HangZhou, Zhejiang,310029, CHINA.
XX
RN [2]
RX DOI; 10.1007/s007050170081.
RX MEDLINE; 21530837.
RX PUBMED; 11676420.
RA Zhou X.P., Xie Y., Zhang Z.K.;
RT "Molecular characterization of a distinct begomovirus infecting tobacco in
RT Yunnan, China";
RL Arch. Virol. 146(8):1599-1606(2001).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2750
FT /country="China:Yunnan"
FT /db_xref="taxon:269283"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Tobacco leaf curl Yunnan virus - [Y143]"
FT /isolate="Y143"
FT CDS 134. .490
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q776Z3"
FT /transl_table=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CAD54829.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKIMDEQAHEQ
FT KAQDVQDVQKSRCP"
FT CDS 294. .1064
FT /db_xref="GOA:Q8B6V2"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8B6V2"
FT /transl_table=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CAD54830.1"
FT /translation="MSKRPADIIISTPASKARRRLNFDSPYVSRAAAPIVRVTKARSWT
FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDVGHMGKVLCLSDVTRGIGLTHR
FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEP
FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT CDS complement(1061. .1465)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q776Z2"
FT /transl_table=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="CAD54831.1"
FT /translation="MDFRTGELLTATQCESGVYTWTIRNPLYFKITKHHERPFNTKHDI
FT IQIQIQFNHNLRKALGIHQCFLSFQIWTRLQPQTWRFLRVFKVQCMKYLDNLGVISINN
FT VIRACNHVLWDVLEKTEYVTNSNIIKFNLY"
FT CDS complement(1206. .1613)
FT /db_xref="GOA:Q8B6V1"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q8B6V1"
FT /transl_table=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="CAD54832.1"
FT /translation="MRNSSPSTAHCTQVPIKVQHRIAKRKPVRRRRVDLTCGCSYYFGI
FT NCANHGFSHRGITHCNSMREWRVYLDDQKSPLFQDNQAPRETIQHQTRHHTDPNTVQPQ
FT PEESVGNTPVFSELPDLDSLTTSDLAFLKSI"
FT CDS complement(1513. .2604)
FT /db_xref="GOA:Q8B6V0"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8B6V0"
FT /transl_table=1
FT /gene="AC1"
FT /product="Rep protein"
FT /protein_id="CAD54833.1"
FT /translation="MAPPKRFKIQAKNYFLTYPQCSLTKEEALSQLQALETPTNKKYIK
FT ICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFH
FT NLNANLDRIFAPPLEVFVSSFFIFIIWIKFPKNLKSGLLDNVRHAAARPWRPISIVIEG
FT ESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRD
FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNSALKEWALKNAEFITLNSP
FT LYSGTNQSATQNSQEEASSQAES"
FT CDS complement(2157. .2447)
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8B6U9"
FT /transl_table=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CAD54834.1"
FT /translation="MGALISTCLSSSKGNTSARITDSSTWYPQQGQHISIRTFRELNPA
FT PTSSPTSTRTETPSNGESFRSTEDLQEGVNRQPMTLTPRHLTAAVSQRLLM"
XX
SQ Sequence 2750 BP; 730 A; 557 C; 610 G; 853 T; 0 other;
AJ512762 Length: 2750 April 19, 2005 08:53 Type: N Check: 6744 ..
1 accggatggc cgcgattttt tttaaagtgg gcccgttgat gtgatatgtc
51 atccaatcag aacgctcccc caaagcttaa ttgttttgtg gtcccttatt
101 taaacttgct caccaagtag tgcactccgc actatgtggg atccattatt
151 aaacgagttt cccgaaaccg ttcacggctt taggtgtatg ttagcagtta
201 aatatctgca gttagtagag aagacttatt cgcctgatac attagggcac
251 gatttaatta gggatttaat ttcagttatt agggctagaa attatgtcga
301 agcgaccagc agatataatc atttccacgc ccgcttcgaa ggcacgccgc
351 cgtctcaact tcgacagccc atatgtgagc cgtgctgctg cccccattgt
401 ccgcgtcacc aaagcaagat catggacgaa caggcccatg aacagaaagc
451 ccaagatgta caggatgtac agaagtccag atgtccctag aggatgtgaa
501 ggcccatgta aggttcaatc ttttgatgct aagaacgatg ttggtcacat
551 gggcaaggtc ttatgtttgt ccgacgttac ccgtggtatt gggcttaccc
601 atcgagttgg caagcgtttc tgtgtcaaat cactttattt tgttggcaag
651 atctggatgg atgaaaatat taaggttaag aaccacacta acaccgtttt
701 attctggata gttagagatc ggcgtcctac tggaacgcct aatgattttc
751 agcaggtctt taatgtatat gataatgaac ccagcactgc tactgtgaag
801 aacgatcagc gtgatcgttt tcaggttata aggaggttcc aggcaacggt
851 gactggtgga caatatgcag cgaaggagca ggcgattatt agaaagtttt
901 atcgtgttaa taattatgta gtttacaatc atcaggaagc tggcaagtat
951 gagaaccata ccgaaaatgc tttgttgttg tatatggcat gtactcatgc
1001 ctctaatcct gtgtatgcta ctttgaaagt caggagttat ttttatgact
1051 cagtgacgaa ttaataaaga ttgaatttta ttatattaga atttgttaca
1101 tattctgttt tttccaatac atcccataat acatgattac acgctctaat
1151 tacattgtta atactaatta cacccaaatt atctaaatat ttcatacatt
1201 gaaccttaaa tactcttaag aaacgccaag tctgaggttg taagcgagtc
1251 cagatctgga agctcagaaa acactggtgt attcccaacg ctttcctcag
1301 gttgtggttg aactgtattt ggatctgtat gatgtcgtgt ttggtgttga
1351 atggtctctc gtggtgcttg gttatcttga aatagagggg atttctgatc
1401 gtccaggtat acacgccact ctcgcattga gttgcagtga gtaattcccc
1451 tgtgcgaaaa tccatgattt gcacaattta tgccgaagta gtatgagcac
1501 ccacacgtta gatcaactct ccgcctgcga actggcttcc tcttggctat
1551 tctgtgttgc actttgattg gtacctgagt acaatgggct gttgagggtg
1601 atgaattccg cattctttaa tgcccactct tttaaagctg aattcttttc
1651 ttcctccaag aattctttat atgatgatgt tgggcctgga ttgcaaagga
1701 agatagttgg gattccacct ttaatttgaa ttggtttccc gtacttggtg
1751 ttgctttgcc agtccctttg ggcccccatg aattctttaa agtgctttag
1801 atagtggggg tctacgtcat caatgacgtt ataccaagca tcattactgt
1851 acacctttgg actcagatcc agatgaccgc acagataatt atgtgggccc
1901 aatgaacgcg cccacatggt ctttcctgta cgactctctc cctctatgac
1951 aatactgatg ggtctccatg gccgcgcagc ggcatgcctt acattatcaa
2001 gcagcccact cttcaagttc ttcgggaact tgatccaaat gatgaagata
2051 aaaaaggagg aaacaaaaac ctctaaagga ggtgcaaaaa tcctatctaa
2101 attagcattt aaattatgaa attgtaaaac aaaatcttta ggagctaact
2151 ccttaattac attaagagcc tctgacttac tgccgctgtt aagtgcctgg
2201 gcgtaagcgt cattggctgt ctgttgaccc cctcttgcag atcttccgtc
2251 gatctgaaac tctccccatt cgagggtgtc tccgtccttg tcgatgtagg
2301 acttgacgtc ggagctggat ttagctccct gaatgttcgg atggaaatgt
2351 gctgaccttg ttggggatac caagtcgaag aatctgttat tcgtgcagac
2401 gtatttccct tcgaactgga taagcacgtg gagatgaggg ctcccatctt
2451 cgtgaagctc tctgcagatt ttgatatatt ttttattagt tggtgtctct
2501 agggcttgta attgggaaag tgcttcttct ttggtgagag agcactgtgg
2551 ataagtgagg aaataatttt tggcttgtat tttaaaacgt ttgggaggag
2601 ccattgactt ggtcaattgg agacattcat agttctctgt caattggaga
2651 caggagacaa tatataggtg tctccaaatg gcatagtggt aatttctcat
2701 agaaattcca ctttaatttg aaatccaaaa gcggccatcc gtataatatt