Sequence of DPV Papaya leaf curl China virus
Papaya leaf curl China virus - [G30] DNA A, complete sequence, isolate G30
ACC No: AJ558117
Dated: 2004-03-30 | Length: 2749 | CRC: -527296541
!!NA_SEQUENCE 1.0
ID PLE558117 standard; circular genomic DNA; VRL; 2749 BP.
XX
AC AJ558117;
XX
SV AJ558117.1
XX
DT 05-JAN-2004 (Rel. 78, Created)
DT 30-MAR-2004 (Rel. 79, Last updated, Version 2)
XX
DE Papaya leaf curl China virus - [G30] DNA A, complete sequence, isolate G30
XX
KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein;
KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein.
XX
OS Papaya leaf curl China virus - [G30]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC Papaya leaf curl virus-[China].
XX
RN [1]
RP 1-2749
RA Zhou X.;
RT ;
RL Submitted (02-MAY-2003) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan
RL Road, Hangzhou, 310029, CHINA.
XX
RN [2]
RA Ma X.;
RT "Molecular characterization of begomoviruses infecting tomato in
RT Guangxi,China";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2749
FT /country="China:Guangxi"
FT /db_xref="taxon:269112"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Papaya leaf curl China virus - [G30]"
FT /segment="DNA A"
FT /isolate="G30"
FT /specific_host="Lycopersicon esculentum"
FT CDS 131. .481
FT /transl_table=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CAD90062.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL
FT ISVIRARDYVEATRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV
FT PKAQDVPDVQKP"
FT CDS 291. .1064
FT /transl_table=1
FT /gene="AV1"
FT /product="AV1 protein"
FT /function="coat protein"
FT /protein_id="CAD90063.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW
FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH
FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE
FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1061. .1465)
FT /transl_table=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="CAD90064.1"
FT /translation="MDFRTGELLTATQCESGVYIWTIKNPLYFKITKHHERPFNTNHDI
FT ITIQIQFNHNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLYNLGVISINN
FT VIRACDHVLWDVLEKTEYVTHSNIIKFNLY"
FT CDS complement(1206. .1613)
FT /transl_table=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="CAD90065.1"
FT /translation="MRNSSPSTAHCTQVPIKVQHKIAKKRPVRRRRVDLTCGCSYYSGI
FT DCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQ
FT PEESVGNTPVFSNLPDLDSLTSSDLAFLKSI"
FT CDS complement(1513. .2601)
FT /transl_table=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /function="Rep protein"
FT /protein_id="CAD90066.1"
FT /translation="MPQPKKFLINAKNYFLTYPQCSLTKEEALSQISALSTPTNKLFIR
FT ICRELHEDGSPHLHVLIQFEGKLKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYM
FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKPAALNILKEKAPKDFVLQFH
FT NLNSNLDRIFSPPQEVFVCPFLSSSFDQVPEELEDWVSENVSGAAARPWRPKSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPL
FT YSGTNQSATQNSQEEARPETES"
FT CDS complement(2151. .2444)
FT /transl_table=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CAD90067.1"
FT /translation="MGLLTCMSSSSSKANSSAKTTDSSISPPQAGQHISIRTFRELKAQ
FT QMLKHTWKKTETCLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPNQRPSIY"
XX
SQ Sequence 2749 BP; 736 A; 550 C; 600 G; 863 T; 0 other;
AJ558117 Length: 2749 April 6, 2004 13:50 Type: N Check: 5759 ..
1 accggatggc cgcgattttt tttatgtggt ccccaccaca aagaaatgtc
51 ctccacttaa aacgctccct caaagcctat ttaattcaaa tccgttataa
101 atacttggtc cccaagtagt cacgtcaaac atgtgggatc ctttactaaa
151 cgagtttccc gaaaccgtac atggttttag atgtatgtta gcgattaagt
201 atttgcaact ggtagaaaat acatactccc cagatacatt agggtacgat
251 ttaattcgtg atttaatttc ggttattcgt gctagagact atgtcgaagc
301 gacccgccga tatagtcatt tccactcccg catccaaggt gcgtcgccgg
351 ctgaatttcg acagcccgta tgccagccgt gctgctgccc ccactgtcct
401 cgtcacaaac aaaaggaggt catgggtgaa tcggcccatg taccgaaagc
451 ccaggatgta ccggatgtac aaaagccctg atgttcctcg tggttgtgaa
501 ggtccatgta aggttcagtc ttatgaacag cgtcatgatg tagcgcacgt
551 aggtaaggtc atttgtgtgt cggatgttac tcgtggtaac gggttgactc
601 atcgagttgg aaagaggttt tgtgttaagt ctgtctatgt tttgggcaag
651 atatggatgg atgagaacat taagaccaag aatcatacta atactgtgat
701 gttttttcta gttcgtgata ggagaccatt tgggactcca caggattttg
751 gtcaggtgtt taatatgtac gataatgagc ctagcactgc tactgttaag
801 aacgacaaca gagatcgctt tcaagttcta cgccgttttc aggcgactgt
851 tactggtggt cagtatgcta gtaaggagca ggcaatagtc aggaaattca
901 tgaaggtgaa caaccatgtt acttataatc atcaagaagc tgcgaagtat
951 gacaatcaca cagagaatgc tcttttgttg tatatggcat gtactcatgc
1001 tagtaatcca gtgtatgcta ctttgaagat cagaatctat ttctatgatt
1051 ctgttcagaa ttaataaaga ttgaatttta ttatatttga atgtgttaca
1101 tattctgttt tttccaatac atcccataat acatgatcac atgctctaat
1151 tacattgtta atactaatta cacccaaatt atataaatat ttcatacatt
1201 gaaccctaaa tactcttaag aaacgccaag tctgaggacg taagcgagtc
1251 cagatctgga agattagaaa acactggtgt attcccaacg ctttcctcag
1301 gttgtggttg aattgtattt ggatcgttat gatgtcgtgg ttggtgttga
1351 atggtctctc gtggtgcttg gttatcttga aatatagggg atttttgatc
1401 gtccagatat acacgccact ctcgcattga gttgcagtga gtaattcccc
1451 tgtgcgaaaa tccatgattt gcacaatcta ttccggagta gtatgagcac
1501 ccgcacgtta gatcaactct ccgtctccgg acgggcctct tcttggctat
1551 tttgtgttgc actttgattg gtacctgagt acaatgggct gttgagggtg
1601 atgaattccg cattctttaa tgcccaatct tttaaagctg aatttttatc
1651 ctcattcaag tactctttat atgatgatgt tgggcctgga ttgcaaagga
1701 agatagttgg aattccacct ttaatttgaa ttggtttccc gtacttagtg
1751 ttgctttgcc agtccctttg ggcccccatg aattctttaa agtgctttag
1801 atagtggggg tctacgtcat caatgacgtt ataccaagcc tcattactgt
1851 atactcttgg gcttagatca agatgtccac acaaataatt gtgtggtccc
1901 agtgatctgg cccacattgt tttacccgta cgactatcac cttctatcac
1951 aatgcttttc ggtctccatg gccgcgcagc ggcaccactc acattctcgg
2001 aaacccagtc ttcaagttct tctggaactt gatcgaaaga agaagacaaa
2051 aaaggacaaa caaacacctc ttgtggagga ctaaaaatcc tatctaaatt
2101 actatttaaa ttatgaaact gtaaaacaaa atctttaggg gccttctcct
2151 ttaatatatt gagggccgct ggtttggacc ctgaattgat tgcctcggca
2201 tatgcgtcgt tggcagattg gcaacctcct ctagctgatc gtccatcgat
2251 ttggaaaact ccatgatcaa gcacgtctcc gtctttttcc atgtatgctt
2301 taacatctgt tgagctttta gctccctgaa tgttcggatg gaaatgtgct
2351 gacctgcttg gggaggtgag atcgaagaat ctgttgtttt ggcacttgag
2401 tttgccttcg aactggatga ggacatgcag gtgaggagac ccatcttcgt
2451 gtagttccct gcaaatacgt atgaataatt tattagtcgg ggttgataag
2501 gctgagattt gggaaagtgc ctcttctttg gtaagggagc actgtggata
2551 agtgaggaaa taattcttgg catttattaa aaattttttt ggttgaggca
2601 tttgacttgg tcaatcgggt cctctcaaac ttccctatgc aatcggggaa
2651 tgggtcctta tttatatgtg aggacctaaa tggcattatt gtaaatagtt
2701 taaagaaatt caaaattcaa aatccaaaag cggccatccg tataatatt