Sequence of DPV Turnip mosaic virus

Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJZC

ACC No: AJ576321

Dated: 2007-03-28 | Length: 874 | CRC: 1487360326

                
ID   AJ576321; SV 1; linear; genomic RNA; STD; VRL; 874 BP.
XX
AC   AJ576321;
XX
DT   14-JUL-2003 (Rel. 76, Created)
DT   28-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJZC
XX
KW   coat protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-874
RA   Zhou X.;
RT   ;
RL   Submitted (05-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RA   Shi M.;
RT   "Pathogen identification of mosaic virus disease of Brassica juncea Coss in
RT   Zhejiang";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .874
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ZJZC"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /db_xref="taxon:12230"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TA91"
FT                   /protein_id="CAE11348.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKNVA
FT                   QEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVQGL"
FT   mat_peptide     <1. .867
FT                   /product="coat protein"
XX
SQ   Sequence 874 BP; 287 A; 182 C; 237 G; 168 T; 0 other;

aj576321 Length: 874  28-MAR-2007  Type: N  Check: 7725  ..

       1  gcaggtgaaa cgcttgacgc aggtttgaca gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaga
     101  agcagttggc actcaagaaa ggcaagaatg ttgcacaaga agagggagaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaactttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctctaaa cctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gattacgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaatg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgacgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaggcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttcaggg gttatgaagt tgta