Sequence of DPV Strawberry mild yellow edge virus

Strawberry mild yellow edge virus cp gene for coat protein and partial TGBp3 gene for triple gene block protein 3, genomic RNA, isolate D/L.13

ACC No: AJ577347

Dated: 2004-07-14 | Length: 878 | CRC: 2067628036

                !!NA_SEQUENCE 1.0
ID   SMI577347  standard; genomic RNA; VRL; 878 BP.
XX
AC   AJ577347;
XX
SV   AJ577347.1
XX
DT   14-JUL-2004 (Rel. 80, Created)
DT   14-JUL-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Strawberry mild yellow edge virus cp gene for coat protein and partial
DE   TGBp3 gene for triple gene block protein 3, genomic RNA, isolate D/L.13
XX
KW   coat protein; cp gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Strawberry mild yellow edge virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-878
RA   Thompson J.R.;
RT   ;
RL   Submitted (15-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Thompson J.R., Virology, Biologische Bundesanstalt, Scwabenheimer Strasse
RL   101, D-69221, GERMANY.
XX
RN   [2]
RA   Thompson J., Jelkmann W.;
RT   "Strain diversity and conserved genome elements in Strawberry mild yellow
RT   edge virus.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .878
FT                   /db_xref="taxon:12187"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Strawberry mild yellow edge virus"
FT                   /isolate="D/L.13"
FT   CDS             <1. .175
FT                   /codon_start=2
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAE11987.1"
FT                   /translation="TIALVSNSGCYVHFDGRSATTTCPPGPWVESIANGLYTAGLARPH
FT                   PESECERRQSSW"
FT   CDS             45. .773
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAE11988.1"
FT                   /translation="MGDQPRPPAPPAPGSNPLPMGSTPPVLPGRTPNPNVNVANQVGDP
FT                   FRVLTPEELAAPIAAASNKVATREQIIQIVADLNALGFVGDPALGLFDLAFHCYDIGSS
FT                   PSAQPVGASPFGCSRMQVAAVVRNHCTLRQLCMFYAPSVWNKAVKDNRPPGNWANLQFT
FT                   PETKFAAFDFFDGVLNPASQQVALWRQPTPQEIYASATHKDVATYRAASKAHDRISNST
FT                   LLTKGASRSTPPALMPGPDA"
FT   3'UTR           774. .878
XX
SQ   Sequence 878 BP; 185 A; 282 C; 203 G; 208 T; 0 other;

  AJ577347  Length: 878  July 20, 2004 08:28  Type: N  Check: 4703  ..

       1  cacaatcgcc ctggtcagta attccggttg ttacgtgcac ttcgatggga
      51  gatcagccac gaccacctgc ccccccggcc cctgggtcga atccattgcc
     101  aatgggctct acaccgccgg tcttgcccgg ccgcaccccg aatccgaatg
     151  tgaacgtcgc caatcaagtt ggtgaccctt tccgggtgct cactcctgag
     201  gaacttgctg ctccgatcgc tgccgccagt aataaggtgg ccactcgcga
     251  gcaaataatc caaattgtcg ctgatctgaa cgccctgggc tttgtcgggg
     301  atccagctct gggtctcttc gacttagcct tccactgcta cgacattggt
     351  tcctcgccct cggcacaacc tgttggcgct tccccttttg gctgctcgcg
     401  catgcaagtc gccgccgttg tccgaaatca ttgcacgctt cgccagctct
     451  gcatgttcta cgccccaagc gtttggaaca aagcagttaa ggacaatcgt
     501  cctcctggca attgggccaa tctccagttc accccggaga caaaatttgc
     551  agcttttgat ttcttcgacg gcgtgctcaa tccagccagc caacaagtcg
     601  ccctgtggcg ccagcccaca ccgcaagaga tttatgcctc agccacccat
     651  aaggatgtag ctacttaccg tgcagctagc aaggcgcacg accgcatttc
     701  caattccacg ctcctgacta aaggagctag tagatccacg ccgcctgcgc
     751  ttatgccagg ccccgatgct taacatccgt ggattaggct taaaatggga
     801  gtttcttctc acttcttcta cccagctcca atgagtgcca tgaagtgaat
     851  atagtactac ttaaccgtac tagtatag