Sequence of DPV Strawberry mild yellow edge virus

Strawberry mild yellow edge virus cp gene for coat protein and partial TGBp3 gene for triple gene block protein 3, genomic RNA, isolate 1182-53F

ACC No: AJ577355

Dated: 2004-07-14 | Length: 878 | CRC: -1004852083

                !!NA_SEQUENCE 1.0
ID   SMI577355  standard; genomic RNA; VRL; 878 BP.
XX
AC   AJ577355;
XX
SV   AJ577355.1
XX
DT   14-JUL-2004 (Rel. 80, Created)
DT   14-JUL-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Strawberry mild yellow edge virus cp gene for coat protein and partial
DE   TGBp3 gene for triple gene block protein 3, genomic RNA, isolate 1182-53F
XX
KW   coat protein; cp gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Strawberry mild yellow edge virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-878
RA   Thompson J.R.;
RT   ;
RL   Submitted (15-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Thompson J.R., Virology, Biologische Bundesanstalt, Scwabenheimer Strasse
RL   101, D-69221, GERMANY.
XX
RN   [2]
RA   Thompson J., Jelkmann W.;
RT   "Strain diversity and conserved genome elements in Strawberry mild yellow
RT   edge virus.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .878
FT                   /db_xref="taxon:12187"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Strawberry mild yellow edge virus"
FT                   /isolate="1182-53F"
FT   CDS             <1. .175
FT                   /codon_start=2
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAE12003.1"
FT                   /translation="TIALVSNSGCYVHFDGRSATTTCPPGPWVESIANGLYTAGLARPH
FT                   PESECERRQSSW"
FT   CDS             45. .773
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAE12004.1"
FT                   /translation="MGDLPRPPAPPAPGLNPLPTGSTPPVLPGRTQNPNANVANQVGDP
FT                   FRVLTPEELAAPIAAASNKVATREQIIQIVADLNALGFVGDPALGLFDLAFHCYDIGSS
FT                   PSAQPVGVSPFGCSRMQVAAVVRNHCTLRQLCMFYAPSVWNKAVKDNRPPGNWANLQFT
FT                   PETKFAAFDFFDGVLNPASQQAALWRQPTPQEIYASATHKDVATYRAASKAHDRISNST
FT                   LLTKGASRSTPPALMPGPDA"
FT   3'UTR           774. .878
XX
SQ   Sequence 878 BP; 183 A; 277 C; 204 G; 214 T; 0 other;

  AJ577355  Length: 878  July 20, 2004 08:28  Type: N  Check: 9498  ..

       1  cacaatcgcc ctggtcagta attccggttg ttacgtgcac ttcgatggga
      51  gatctgccac gaccacctgc ccccccggcc cctgggttga atccattgcc
     101  aacgggctct acaccgccgg tcttgcccgg ccgcacccag aatccgaatg
     151  cgaacgtcgc caatcaagtt ggtgaccctt tccgggtgct cactcctgag
     201  gaacttgctg ctccgatcgc cgctgccagt aataaggtgg ccactcgcga
     251  gcagataatc caaatcgtcg ctgatctgaa cgccttgggc tttgtcgggg
     301  atccagctct gggtctcttt gacttagcct tccactgtta cgacattggt
     351  tcttcgccct cggcacaacc tgtgggcgtt tccccttttg gctgctctcg
     401  catgcaagtt gccgccgtcg tccgaaatca ttgcacgctt cgccagctct
     451  gcatgttcta cgccccaagt gtttggaaca aagcagttaa ggacaatcgt
     501  cctcctggca attgggccaa tctccagttc accccggaga caaaatttgc
     551  agcttttgat ttcttcgacg gcgtgctcaa tccagccagt caacaagccg
     601  ccctgtggcg ccagcccaca ccgcaagaga tttacgcctc agccacccat
     651  aaggatgtag ctacttatcg tgcagccagt aaggcgcacg accgcatttc
     701  caattccacg ctcctgacta aaggagctag tagatccacg ccgcctgcgc
     751  ttatgccagg ccccgatgct taacatccgt ggattaggct ttaaatggga
     801  gtttcttctc acttcttcta cccagctcca atgagtgcca tgaagtgaat
     851  atagtactac ttaaccgtac tagtatag