Sequence of DPV Strawberry mild yellow edge virus

Strawberry mild yellow edge virus cp gene for coat protein and partial TGBp3 gene for triple gene block protein 3, genomic RNA, isolate IndukaA

ACC No: AJ577356

Dated: 2004-07-14 | Length: 878 | CRC: -1263153846

                !!NA_SEQUENCE 1.0
ID   SMI577356  standard; genomic RNA; VRL; 878 BP.
XX
AC   AJ577356;
XX
SV   AJ577356.1
XX
DT   14-JUL-2004 (Rel. 80, Created)
DT   14-JUL-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Strawberry mild yellow edge virus cp gene for coat protein and partial
DE   TGBp3 gene for triple gene block protein 3, genomic RNA, isolate IndukaA
XX
KW   coat protein; cp gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Strawberry mild yellow edge virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-878
RA   Thompson J.R.;
RT   ;
RL   Submitted (15-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Thompson J.R., Virology, Biologische Bundesanstalt, Scwabenheimer Strasse
RL   101, D-69221, GERMANY.
XX
RN   [2]
RA   Thompson J., Jelkmann W.;
RT   "Strain diversity and conserved genome elements in Strawberry mild yellow
RT   edge virus.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .878
FT                   /db_xref="taxon:12187"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Strawberry mild yellow edge virus"
FT                   /isolate="IndukaA"
FT   CDS             <1. .175
FT                   /codon_start=2
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAE12005.1"
FT                   /translation="TIALVSNSGCYVHFDGRSATTTCPPGPWVESIANGLYTVGLARPH
FT                   PKSECKRCQSSW"
FT   CDS             45. .773
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAE12006.1"
FT                   /translation="MGDLPRPPAPPAPGSNPLPMGSTPSDLPGRTPNPNVNVANQVGDP
FT                   FRVLTPEELAAPIAAASNKVATREQIIQIVADLNALGFVGDPALGLFDLAFHCYDIGSS
FT                   PSAQPVGASPFGCSRMQVAAVVRNHCTLRQLCMFYAPSVWNKAVKDNRPPGNWANLQFT
FT                   PETKFAAFDFFDGVLNPASQQVALWRQPTPQEIYASATHKDVATYRAASKAHDRISNST
FT                   LLTKGASRSTPPALMPGPDA"
FT   3'UTR           774. .878
XX
SQ   Sequence 878 BP; 187 A; 279 C; 202 G; 210 T; 0 other;

  AJ577356  Length: 878  July 20, 2004 08:28  Type: N  Check: 6205  ..

       1  cacaatcgcc ctggtcagta actccggttg ttacgtgcac ttcgatggga
      51  gatctgccac gaccacctgc ccccccggcc cctgggtcga atccattgcc
     101  aatgggctct acaccgtcgg acttgcccgg ccgcacccca aatccgaatg
     151  taaacgttgc caatcaagtt ggtgaccctt tccgggtgct cactcctgag
     201  gaacttgctg ctccgatcgc tgctgccagt aataaggtgg ctactcgcga
     251  gcaaataatc caaattgtcg ctgatctgaa cgccctgggc tttgtcggag
     301  atccagctct gggtctcttc gacttagcct tccactgcta cgacattggt
     351  tcctcgccct cggcacaacc tgttggcgct tcccctttcg gctgctcgcg
     401  catgcaagtt gccgccgtcg tccgaaatca ttgcacgctt cgccagctct
     451  gcatgttcta cgccccaagc gtttggaaca aagcagttaa ggacaatcgt
     501  cctcctggca attgggccaa tctccagttc accccggaga caaaatttgc
     551  agcttttgat ttcttcgacg gcgtgctcaa tccagccagc caacaggtcg
     601  ccctgtggcg ccagccgaca ccgcaagaga tttatgcctc agccacccat
     651  aaggatgtag ctacctatcg tgcagccagt aaggcgcacg accgcatttc
     701  caattccacg ctcctgacta aaggagctag tagatccacg ccgcctgcgc
     751  ttatgccagg ccccgatgct taacatccgt ggattaggct taaaatggga
     801  gtttcttctc acttcttcta cccagctcca atgagtgcca tgaagtgaat
     851  atagtactac ttaaccgtac tagtatag