Sequence of DPV Strawberry mild yellow edge virus

Strawberry mild yellow edge virus cp gene for coat protein and partial TGBp3 gene for triple gene block protein 3, genomic RNA, isolate WSU1988

ACC No: AJ577358

Dated: 2004-07-14 | Length: 878 | CRC: 1699984969

                !!NA_SEQUENCE 1.0
ID   SMI577358  standard; genomic RNA; VRL; 878 BP.
XX
AC   AJ577358;
XX
SV   AJ577358.1
XX
DT   14-JUL-2004 (Rel. 80, Created)
DT   14-JUL-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Strawberry mild yellow edge virus cp gene for coat protein and partial
DE   TGBp3 gene for triple gene block protein 3, genomic RNA, isolate WSU1988
XX
KW   coat protein; cp gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Strawberry mild yellow edge virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-878
RA   Thompson J.R.;
RT   ;
RL   Submitted (15-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Thompson J.R., Virology, Biologische Bundesanstalt, Schwabenheimer Strasse
RL   101, D-69221, GERMANY.
XX
RN   [2]
RA   Thompson J., Jelkmann W.;
RT   "Strain diversity and conserved genome elements in Strawberry mild yellow
RT   edge virus.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .878
FT                   /db_xref="taxon:12187"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Strawberry mild yellow edge virus"
FT                   /isolate="WSU1988"
FT   CDS             <1. .175
FT                   /codon_start=2
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAE12009.1"
FT                   /translation="TIALVSNSGCYVHFDGRSATTTCPPGPWVESIANGLYTAGLARPH
FT                   PESECKRRQSSW"
FT   CDS             45. .773
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAE12010.1"
FT                   /translation="MGDLPRPPAPPAPGSNPLPMGSTPPVLPGRTPNPNVNVANQVGDP
FT                   FRVLTPEELAAPIAAASNKVATREQIIQIVADLNALGFVGDPALGLFDLAFHCYDIGSS
FT                   PSAQPVGASPFGCSRMQVAAVVRNHCTLRQLCMFYAPSVWNKAVKDNRPPGNWANLQFT
FT                   PETKFAAFDFFDGVLNPASQQVALWRQPTPQEIYASATHKDVATYRAASKAHDRISNST
FT                   LLTKGASRSTPPALMPGPDA"
XX
SQ   Sequence 878 BP; 184 A; 278 C; 203 G; 213 T; 0 other;

  AJ577358  Length: 878  July 20, 2004 08:28  Type: N  Check: 8284  ..

       1  cacaatcgcc ctggtcagta attccggttg ttacgtgcac ttcgatggga
      51  gatctgccac gaccacctgc ccccccggcc cctgggtcga atccattgcc
     101  aatgggctct acaccgccgg tcttgcccgg ccgcaccccg aatccgaatg
     151  taaacgtcgc caatcaagtt ggtgaccctt tccgggtgct cactcctgag
     201  gaacttgctg ctccgatcgc tgctgccagt aataaggtgg ccactcgcga
     251  gcaaataatc caaattgtcg ctgatctgaa cgccttgggc tttgtcgggg
     301  atccagctct gggtctcttc gacttagcct tccactgcta cgacattggt
     351  tcctcgccct cggcacaacc tgttggcgct tccccttttg gctgctcgcg
     401  catgcaagtt gccgccgttg tccgaaatca ttgcacgctt cgccagctct
     451  gcatgttcta cgccccaagc gtttggaaca aagcagttaa ggacaatcgt
     501  cctcctggca attgggccaa tctccagttc accccggaga caaaatttgc
     551  agcttttgat ttcttcgacg gcgtgctcaa tccagccagc caacaagtcg
     601  ccctgtggcg ccagcccaca ccgcaagaga tttatgcctc agccactcat
     651  aaggatgtag ctacttatcg tgcggccagt aaggcgcacg accgcatttc
     701  caattccacg ctcctgacta aaggagctag tagatccacg ccgcctgcgc
     751  ttatgccagg ccccgatgct taacatccgc ggattaggct taaaatggga
     801  gtttcttctc acttcttcta cccagctcca atgagtgcca tgaagtgaat
     851  atagtactac ttaaccgtac tagtatag