Sequence of DPV Rice stripe virus

Rice stripe virus SP gene for disease-specific protein, genomic RNA, isolate GDu1

ACC No: AJ578465

Dated: 2004-07-01 | Length: 1067 | CRC: -831133544

                !!NA_SEQUENCE 1.0
ID   RST578465  standard; genomic RNA; VRL; 1067 BP.
XX
AC   AJ578465;
XX
SV   AJ578465.1
XX
DT   01-JUL-2004 (Rel. 80, Created)
DT   01-JUL-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Rice stripe virus SP gene for disease-specific protein, genomic RNA,
DE   isolate GDu1
XX
KW   disease-specific protein; SP gene.
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-1067
RA   Li F.;
RT   ;
RL   Submitted (26-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Li F., Department of Plant Pathology, Key Laboratory for Plant Pathology ,
RL   Yunnan Agricultural University, Kunming, Yunnan, 650201, CHINA.
XX
RN   [2]
RA   Li F., Yang J., Chen H., Wu Z., Xie L.;
RT   "Genetic diversity of rice stripe virus in the SP gene in Yunnan";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1067
FT                   /country="China:GuanDu, Yunnan"
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /isolate="GDu1"
FT   CDS             55. .591
FT                   /gene="SP"
FT                   /product="disease-specific protein"
FT                   /function="possibly involved in pathogenicity"
FT                   /protein_id="CAE17660.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNILQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYLESIIQPLLHKT"
XX
SQ   Sequence 1067 BP; 366 A; 205 C; 195 G; 301 T; 0 other;

  AJ578465  Length: 1067  July 6, 2004 08:55  Type: N  Check: 8623  ..

       1  acacaaagtc cagggcattt gtacgacgat ccagcaattt aatcagaatc
      51  gaagatgcaa gacgtacaaa ggacaataga agtttctgtt ggtcctattg
     101  taggcctaga ttacactctg ttgtatgaca ctctgcccga gactgtgagc
     151  gataatatta ctctacctga tttgaaagat ccagagagag tcacggaaga
     201  tactaagaag ctaatactca aaggctgtgt ttatatagca tatcatcacc
     251  ccttggagac tgacactctc ttcattaaag ttcacaagca tataccagag
     301  ttttgtcact ccttcctatc acaccttcta ggaggtgaag atgatgacaa
     351  tgctctgata gacattggcc tgttcttcaa catcttgcaa ccctctctgg
     401  gcggttggat aaccaagaat tttcttagac acccaaacag gatgtctaag
     451  gaccaaatta aaatgctcct ggatcagatt ataaagatgg ctaaggcaga
     501  gagctcagac acagaagagt atgagaaagt gtggaagaag atgccaactt
     551  atcttgagtc aatcatccaa cctcttctac acaaaacata gtctattgca
     601  tatcatatag tcctacctac gagtgcttgc attctaggag tgaagccaga
     651  ttgggctgac ctgctagtat aaaaatataa gtatattata gtttaagaga
     701  tatacacgat gtttgttcac ttgagcttgg cagtttgcaa gtaattgtgt
     751  gtaattgtgc ataaatatat atatgtcaat atgtaactat acataggtgt
     801  gcagatgtaa acacttgaaa caaatataca cctttcaact tatatacacg
     851  cttgtaagtc ttggttcttc ttaacacaaa catagaaaca tgagagtatc
     901  aattagaact gccttggtat tataagcaca gatatatctg tgtgtagaga
     951  acactcaagg ctaagaattc tctaacatcg ctttatacaa aaaccattat
    1001  aaaaatacta acaactttgt tttcacaatg tcaacgctaa aaactgaaat
    1051  gccaaaaaca tgagaaa