Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus Cp gene for coat protein, isolate SKP2

ACC No: AJ585203

Dated: 2006-05-19 | Length: 672 | CRC: 771372180

                
ID   AJ585203   standard; other DNA; VRL; 672 BP.
XX
AC   AJ585203;
XX
SV   AJ585203.2
XX
DT   10-OCT-2003 (Rel. 77, Created)
DT   19-MAY-2006 (Rel. 87, Last updated, Version 3)
XX
DE   Cymbidium mosaic virus Cp gene for coat protein, isolate SKP2
XX
KW   coat protein ; Cp gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RC   revised by [3]
RA   Sherpa A.R.;
RT   ;
RL   Submitted (07-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Sherpa A.R., Plant virus Lab, Floriculture Division, Inst. of Himalayan
RL   Biresource Technology, IHBT, Palampur, H.P., India, Himachal pradesh, P.B.#
RL   6,  176061, INDIA.
XX
RN   [3]
RP   1-672
RA   Sherpa A.R.;
RT   ;
RL   Submitted (10-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Sherpa A.R., Plant virus Lab, Floriculture Division, Inst. of Himalayan
RL   Biresource Technology, IHBT, Palampur, H.P., India, Himachal pradesh, P.B.#
RL   6,  176061, INDIA.
XX
RN   [4]
RA   Sherpa A.R., Hallan V., Pathak P., Zaidi A.A.;
RT   "Characterization of the Coat Protein Gene of Cymbidium mosaic virus
RT   Isolates from India";
RL   J. Phytopathol. 154(5):275-280(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Cymbidium mosaic virus"
FT                   /specific_host="Orchids"
FT                   /isolate="SKP2"
FT                   /mol_type="other DNA"
FT                   /country="India:Sikkim"
FT                   /virion
FT                   /db_xref="taxon:12178"
FT   CDS             1. .672
FT                   /gene="Cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q70DV3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q70DV3"
FT                   /protein_id="CAE51200.1"
FT                   /translation="MGESTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTFYGLPAPPT
FT                   E"
XX
SQ   Sequence 672 BP; 130 A; 240 C; 160 G; 142 T; 0 other;

aj585203 Length: 672  19-MAY-2006  Type: N  Check: 4192  ..

       1  atgggagagt ccactccaac tccagccgcc acttactccg ctgccgaccc
      51  cacttctgca cccaagttgg ccgacctggc tgccattaag tactcacctg
     101  tcacctcctc catcgctacc cccgaagaaa tcaaggccat aacccaattg
     151  tgggttaaca atcttggcct ccccgccgac acagtaggta ccgcggccat
     201  tgacctggct cgcgcctacg ctgacgtcgg ggcgtccaag agtgctaccc
     251  tgctcggctt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta
     351  cgcaaaagtg gtgtggaatt tgatgctggc tactaacgat ccgcccgcca
     401  actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac
     451  ttcttcgatg ccgtcgattc cactgccgcg ctggagcctg ctgaatggca
     501  gcgccgccct actgaccgtg aacgtgctgc gcactcgatc gggaagtacg
     551  gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt
     601  gccgaggtca ccaagggcca tcttggctcc accaacactt tctatggtct
     651  gcctgcaccc cctactgaat aa