Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene for nonstructural protein, genomic RNA, isolate HZe1

ACC No: AJ620314

Dated: 2004-01-06 | Length: 652 | CRC: -648765775

                !!NA_SEQUENCE 1.0
ID   AJ620314   standard; genomic RNA; VRL; 652 BP.
XX
AC   AJ620314;
XX
SV   AJ620314.1
XX
DT   06-JAN-2004 (Rel. 78, Created)
DT   06-JAN-2004 (Rel. 78, Last updated, Version 1)
XX
DE   Rice stripe virus NS3 gene for nonstructural protein, genomic RNA, isolate
DE   HZe1
XX
KW   nonstructural protein; NS3 gene.
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-652
RA   Li F.;
RT   ;
RL   Submitted (06-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Li F., Plant Pathology, Institute of Plant Virology, Fujian Agriculture and
RL   Forestry University, Fuzhou, Fujian Province, 350002, CHINA.
XX
RN   [2]
RA   Yang J., Li F., Wu Z., Chen H., Xie L.;
RT   "Genetic diversity of NS3 gene of Rice stripe virus of Yunnan isolates";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .652
FT                   /country="China:Jiangsu, Hongze"
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /isolate="HZe1"
FT                   /segment="3"
FT   CDS             17. .652
FT                   /gene="NS3"
FT                   /product="nonstructural protein"
FT                   /protein_id="CAF04342.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGFFLKTLIWILSHDKNLPEEHRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSTLEPSPGSSPAVL"
XX
SQ   Sequence 652 BP; 176 A; 149 C; 125 G; 202 T; 0 other;

AJ620314  Length: 652  January 13, 2004 08:52  Type: N  Check: 8891  ..

       1  ccgacatcat ctaagtatga acgtgttcac atcgtctgta ggttctgtgg
      51  aatttgatca tcctctgctt ttggagaatg atctgaccag tttgagcata
     101  aactgtgatg atgtccattg ttcttcaaga gccttatgtt atatatatga
     151  cattcattca tctaggcacc cctccattga tgagcatcag tttctgaggc
     201  ttcttcatgg ccctgatgat gctgtcactc taggcttctt cttgaaaact
     251  ctgatctgga ttctgtctca tgataagaat ctcccagaag agcacagact
     301  tcctactata atgatgtcat cctcatatgt gaaattcttc actgaagtga
     351  agccaagacc cccatcaaca aattgctgga catgcagaat gtccaaagac
     401  aatttgccct ttaccgttcc tagtgtcaag ggatttcctc cagatgcaga
     451  gctctatatt gtgccaatat ctgaccatga tggaaagcct gtcaaatttg
     501  acaataggaa gactctatat agatcaccta gtaagaaaag gcataagtat
     551  gtcatttctt ctgataaacc acctcttagt gcacgttatg ttaagtacgt
     601  tgattctagt acactggagc cctcacctgg cagctctcca gctgtgctgt
     651  ag