Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene for nonstructural protein, genomic RNA, isolate LQu1

ACC No: AJ620316

Dated: 2005-01-05 | Length: 652 | CRC: 109622412

                !!NA_SEQUENCE 1.0
ID   AJ620316   standard; genomic RNA; VRL; 652 BP.
XX
AC   AJ620316;
XX
SV   AJ620316.1
XX
DT   06-JAN-2004 (Rel. 78, Created)
DT   05-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Rice stripe virus NS3 gene for nonstructural protein, genomic RNA, isolate
DE   LQu1
XX
KW   nonstructural protein; NS3 gene.
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-652
RA   Li F.;
RT   ;
RL   Submitted (06-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Li F., Plant Pathology, Institute of Plant Virology, Fujian Agriculture and
RL   Forestry University, Fuzhou, Fujian Province, 350002, CHINA.
XX
RN   [2]
RA   Yang J., Li F., Wu Z., Chen H., Xie L.;
RT   "Genetic diversity of NS3 gene of Rice stripe virus of Yunnan isolates";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .652
FT                   /country="China:Yunnan, Luquan"
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /segment="3"
FT                   /isolate="LQu1"
FT   CDS             17. .652
FT                   /db_xref="GOA:Q7TFY7"
FT                   /db_xref="UniProt/TrEMBL:Q7TFY7"
FT                   /gene="NS3"
FT                   /product="nonstructural protein"
FT                   /protein_id="CAF04344.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCEDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEFRLPAIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKKHKYVISSDKPPLSARYVKYVDSSALGPSPGSSPAVL"
XX
SQ   Sequence 652 BP; 171 A; 154 C; 131 G; 196 T; 0 other;

AJ620316  Length: 652  January 11, 2005 08:38  Type: N  Check: 8112  ..

       1  ccgacatcat ctaagtatga acgtgttcac atcgtctgtg ggttctgtgg
      51  aatttgatca tcctctactt ttggagaatg atctgaccag tctgagcatc
     101  aactgtgaag atgtccactg ctcttcaagg gctttatgtt atatatatga
     151  catccattca tctaggcacc cctccattga tgagcatcag tttctgaggc
     201  ttctacatgg tcctgatgat gctgtcactc taggctcttt cttaaagact
     251  ctgatctgga ttctgtccca tgataagaac ctcccagaag agttcagact
     301  tcctgctata atgatgtcat cctcttatgt gaagttcttc actgaagtga
     351  agccacgacc cccatcaaca aattgctgga catgcaggat gtctaaggac
     401  aatttgccct ttaccgttcc tagtgtcaaa ggttttcctc cagatgcaga
     451  gctttacatt gtgccaatat ctgaccatga tggaaagcct gtcaaatttg
     501  acaataggaa gactctatat agatcaccta gtaagaaaaa gcataagtat
     551  gtcatttcct cagataagcc acctctcagt gcacgttatg ttaagtacgt
     601  ggattctagt gcactaggac catcgccagg cagctctcca gctgtgctgt
     651  ag