Sequence of DPV Tomato yellow leaf curl China virus
Tomato yellow leaf curl China virus-[Y43] complete genome, isolate Y43
ACC No: AJ781302
Dated: 2004-12-01 | Length: 2738 | CRC: -843393112
!!NA_SEQUENCE 1.0
ID AJ781302 standard; circular genomic DNA; VRL; 2738 BP.
XX
AC AJ781302;
XX
SV AJ781302.1
XX
DT 15-JUL-2004 (Rel. 80, Created)
DT 01-DEC-2004 (Rel. 82, Last updated, Version 4)
XX
DE Tomato yellow leaf curl China virus-[Y43] complete genome, isolate Y43
XX
KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein;
KW complete genome; rep protein.
XX
OS Tomato yellow leaf curl China virus-[Y43]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC Tomato yellow leaf curl China virus.
XX
RN [1]
RP 1-2738
RA Zhou X.;
RT ;
RL Submitted (04-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, 310029, Zhejiang,
RL CHINA.
XX
RN [2]
RA Cie X., Tao X., Xie Y., Fauquet C.M., Zhou X.;
RT "A DNA beta associated with Tomato yellow leaf curl China virus is r
RT equired for symptom induction in hosts";
RL J. Virol. 78(4):13966-13974(2004).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2738
FT /db_xref="taxon:284541"
FT /mol_type="genomic DNA"
FT /organism="Tomato yellow leaf curl China virus-[Y43]"
FT CDS 129. .476
FT /db_xref="UniProt/TrEMBL:Q6EV87"
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CAH03764.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL
FT ILVIRARDYGEASRRYSHFHSRLEGASPAELRQPIHGSCCCPHCPRHQKANVGKQAHVS
FT EAHDVPDVQKP"
FT CDS 289. .1059
FT /db_xref="GOA:Q6EV86"
FT /db_xref="UniProt/TrEMBL:Q6EV86"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CAH03765.1"
FT /translation="MAKRPADIVISTPASKVRRRLNFDSPYTGRAAVPTVRVTRRQMWA
FT NRPMYRKPMMYRMYRSPDVPRGCEGPCKVQSYEARHDVSHTGKVICVSDVTRGNGITHR
FT VGKRFCVKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP
FT STATVKNDLRDRFQVRRKFYATVTGGQYACKEQALVKKFLRVNTHVVYNHQEQAKYENH
FT TENALLLYMVSTHASNPVYATLKVRIYFYDSQMN"
FT CDS complement(1056. .1460)
FT /db_xref="UniProt/TrEMBL:Q6EV85"
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="CAH03766.1"
FT /translation="MDSRTGELLTAAQAENGVYIWTVKNPLYFKITKHYERPFLRNHDI
FT ITLQVQFNYNLRKALGIHKCFLTCKIWTRLRPQTLRFLRVFKFQCIKYLDRLGVISINN
FT VIRAISHVLYNVLEGTIDVLEDHDIKLNIY"
FT CDS complement(1201. .1605)
FT /db_xref="GOA:Q6EV84"
FT /db_xref="UniProt/TrEMBL:Q6EV84"
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="CAH03767.1"
FT /translation="MQSSSPSNAHSTQVPIKVQHRIAKRTTRRRRVDLPCGCSYFIALG
FT CHDNGFTHRGTTHCSSSREWRLYLDGQKSPLFQDNKTLRKTIPEEPRHNHITSPIQLQP
FT EESVGDTQMFSNLQNLDSFTSSDLAFLKSI"
FT CDS complement(1508. .2593)
FT /db_xref="GOA:Q6EV83"
FT /db_xref="UniProt/TrEMBL:Q6EV83"
FT /gene="AC1"
FT /product="Rep protein"
FT /protein_id="CAH03768.1"
FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEETLSQIKALETPVNKLFIR
FT ICRELHVDGTPHLHVLIQFEGKFQCKNQRFFDLISPHRSAHFHPNIQGAKSSTDVKTYM
FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH
FT NLNNNLDRIFTPPLEEYISPFSSSSFDQVPEELDEWAIENVVSAAARPLRPVSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALKNWAVKNAIFVTLQRPL
FT YSSSYQGTTPNRQEDNQTTES"
FT CDS complement(2143. .2436)
FT /db_xref="UniProt/TrEMBL:Q6EV82"
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CAH03769.1"
FT /translation="MGLLTCMSSSSSKESSSVKTKDSSISYPHIGQHISIRTFRELKAQ
FT QMSKHTWRKTETCLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKLRPSIY"
XX
SQ Sequence 2738 BP; 734 A; 544 C; 607 G; 853 T; 0 other;
AJ781302 Length: 2738 December 7, 2004 09:04 Type: N Check: 2044 ..
1 accggatggc cgcgcgattt ttttaaagtg gtccccgcag acaagtgtat
51 ccaatcctat ccgctcctca aagcttaatt attaaatggt cccctataaa
101 acttagcccc caagtattga cgttaaacat gtgggatcct ctactcaacg
151 agttccctga aaccgtacat gggtttaggt gcatgttagc aattaagtat
201 ttgcagttag tcgaaaatac ttattccccc gatacattag gttacgattt
251 aatacgtgat ttaattttag ttatacgtgc tagagattat ggcgaagcgt
301 cccgccgata tagtcatttc cactcccgcc tcgaaggtgc gtcgccggct
351 gaacttcgac agcccataca cgggtcgtgc tgctgtcccc actgtccgcg
401 tcaccagaag gcaaatgtgg gcaaacaggc ccatgtatcg gaagcccatg
451 atgtaccgga tgtacagaag ccctgatgtt cccaggggtt gtgaaggtcc
501 atgtaaagtt cagtcctatg aggcccgtca tgatgtttct catactggta
551 aggttatttg tgtaagtgat gttacacgtg gtaatggaat tactcatcgt
601 gttggtaaga ggttttgtgt taaatctatt tacgtcattg ggaagatatg
651 gatggacgag aatataaaag tgaagaacca tacaaatacg gtgatgtttt
701 ttctggtaag agatcgccgt ccgagtggaa cacctatgga tttccagcaa
751 gtctttaatt gttatgacaa tgaacccagt actgctactg taaaaaacga
801 tttaagggat cgttttcaag ttcgtcgtaa gttctatgcc acggttacag
851 gtggacagta cgcttgtaag gagcaggcgt tggtcaagaa atttctacgg
901 gttaacacac atgtcgttta caatcaccaa gaacaggcga agtatgagaa
951 tcatacagag aatgctttgt tgttgtatat ggtttctact catgcaagta
1001 atcctgtata tgcgactttg aaagtccgca tttatttcta tgactctcaa
1051 atgaattaat aaatattgag ttttatatca tgatcttcga gtacatcaat
1101 tgtgccttct agtacattat acaatacatg agatattgct cttattacat
1151 tgttgatgct aatcacgcct aacctatcta aatatttaat acattgaaat
1201 ttaaatactc ttaagaaacg caaggtctga ggacgtaaac gagtccagat
1251 tttgcaggtt agaaaacatt tgtgtatccc caacgctttc ctcaggttgt
1301 agttgaattg gacttgtaat gtgattatgt cgtggttcct caggaatggt
1351 ctttcgtagt gttttgttat cttgaaataa aggggatttt tgaccgtcca
1401 gatataaacg ccattctctg cttgagctgc agtgagtagt tccccggtgc
1451 gtgaatccat tatcgtgaca gcctagagcg atgaagtatg aacagccaca
1501 cggtagatca actctccgtc gtctggttgt cctcttggcg attcggtgtt
1551 gtaccttgat aggaacttga gtagagtggg cgttggaggg tgacgaagat
1601 tgcatttttt accgcccagt ttttaagtgc ggagttcttt tcctcttcca
1651 gatactcttt atagctggaa ttgggtcctg gattgcagag gaagatagtg
1701 ggtataccac ctttaatttg aactggcttg ccgtatttgg tgttgctttg
1751 ccagtccctt tgggccccca tgaattcttt aaagtgcttt aagtagtgcg
1801 gatcgacgtc atcaatgacg ttgaaccacg catcattatt gtacaccttt
1851 ggactcaaat ccagatgacc acacaaataa ttatgtggtc ctaatgacct
1901 ggcccacatc gtcttccccg tcctgctatc accctctatg actatactta
1951 ccggtctcaa aggccgcgca gcggcactca caacattttc tattgcccat
2001 tcatcaagtt cttctggaac ttgatcaaaa gaagaagaag aaaaaggaga
2051 aatatattcc tctaatggag gagtaaaaat cctatctaaa ttattattta
2101 aattatgaaa ctgtaaaaca aaatccttag gagccttctc cctcagtata
2151 ttgagggccg aagctttgga ccctgaattg attgcctcgg catatgcgtc
2201 gttggcagat tggcaacctc ctctagctga tcgtccatcg atttggaaaa
2251 ctccatgatc aagcacgtct ccgtctttct ccatgtatgt tttgacatct
2301 gttgagcttt tagctccctg aatgttcgga tggaaatgtg ctgacctatg
2351 tggggatatg agatcgaaga atctttggtt tttacactgg aactttcctt
2401 cgaactggat gaggacatgc aggtgaggag tcccatctac gtgcaattct
2451 ctacagattc ggatgaatag tttattaact ggggtttcta gggctttaat
2501 ttgggaaagt gtctcttctt tggtgagaga acagtgtggg tatgtaagga
2551 aataattttt ggcatttatt ctgaatttat ttggaggagc cattgactgg
2601 tcaattggtg tctctcaaac ttggctatgc aatcggtgtc tggggtctta
2651 tttatatgtg gacaccaaat ggcataattg taaattctta atggaaattc
2701 aaaattcaaa atgcaaaagc ggccatccgt ataatatt