Sequence of DPV Turnip mosaic virus

Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ2

ACC No: AJ831809

Dated: 2008-04-01 | Length: 864 | CRC: -737128082

                
ID   AJ831809; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AJ831809;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ2
XX
KW   coat protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-864
RA   Zhou X.;
RT   ;
RL   Submitted (16-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of cp and hc-pro genes of turnip mosaic virus isolates
RT   from china";
RL   Acta Virol. 52:59-62(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /organism="Turnip mosaic virus"
FT                   /specific_host="turnip"
FT                   /isolate="ZJ2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hangzhou:Zhejiang"
FT                   /virion
FT                   /db_xref="taxon:12230"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659N0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q659N0"
FT                   /protein_id="CAH42007.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKRGKNVA
FT                   QEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVQGL"
FT   mat_peptide     <1. .>864
FT                   /product="coat protein"
XX
SQ   Sequence 864 BP; 281 A; 180 C; 237 G; 166 T; 0 other;

aj831809 Length: 864  01-APR-2008  Type: N  Check: 8715  ..

       1  gcaggtgaaa cgcttgacgc aggtttgaca gatgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaga
     101  agcagttggc actcaagaga ggcaagaatg ttgcacaaga agagggggaa
     151  cgcgacaagg aagtgaacgc tggaacctct ggaactttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctctaaa cctcgatcat ctaatcctat atacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gattacgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaggcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttcaggg gtta