Sequence of DPV Rice stripe virus
Rice stripe virus RNA4 SP gene for disease specific protein and NSvc4 gene for putative movement protein, isolate BSh04, genomic RNA, complete virus segment
ACC No: AJ871748
Dated: 2006-02-10 | Length: 2236 | CRC: 1806503683
ID AJ871748 standard; genomic RNA; VRL; 2236 BP.
XX
AC AJ871748;
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SV AJ871748.1
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DT 07-JAN-2005 (Rel. 82, Created)
DT 10-FEB-2006 (Rel. 86, Last updated, Version 5)
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DE Rice stripe virus RNA4 SP gene for disease specific protein and NSvc4 gene
DE for putative movement protein, isolate BSh04, genomic RNA, complete virus
DE segment
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KW disease specific protein; movement protein; NSvc4 gene; SP gene.
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OS Rice stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN [1]
RP 1-2236
RA Li F.;
RT ;
RL Submitted (22-DEC-2004) to the EMBL/GenBank/DDBJ databases.
RL Li F., Plant Pathology, Institute of Plant Virology, Fujian Agriculture and
RL Forestry University, Fuzhou,350002,, Fujian province, CHINA.
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FH Key Location/Qualifiers
FH
FT source 1. .2236
FT /country="China:Yunnan Province, Baoshan"
FT /db_xref="taxon:12331"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Rice stripe virus"
FT /isolate="BSh04"
FT /segment="RNA4"
FT CDS 55. .591
FT /db_xref="InterPro:IPR006960"
FT /db_xref="UniProtKB/TrEMBL:O10389"
FT /gene="SP"
FT /product="disease specific protein"
FT /protein_id="CAI40346.1"
FT /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT GLFFNILQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT PTYFESIIQPLLHKT"
FT CDS complement(1325. .2185)
FT /db_xref="InterPro:IPR004980"
FT /db_xref="UniProtKB/TrEMBL:Q5K016"
FT /gene="NSvc4"
FT /product="putative movement protein"
FT /protein_id="CAI40347.1"
FT /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPCWFHQPLT
FT HYPFFRVATFAMVWIGIKGRASGVTTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTSDTVMFEFEPL
FT EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT VSVIM"
XX
SQ Sequence 2236 BP; 718 A; 465 C; 421 G; 632 T; 0 other;
aj871748 Length: 2236 10-FEB-2006 Type: N Check: 6800 ..
1 acacaaagtc cagggcattt gtgcaacgat ccagcaattt aatcagaatc
51 gaagatgcaa gacgtacaaa ggacaataga agtttctgtt ggtcctattg
101 taggcctaga ttacactctg ttgtatgaca ctctgcccga gactgtgagc
151 gataatatta ctctacctga tttgaaagat ccagagagag tcacggaaga
201 tactaagaag ctaatactca aaggctgtgt ttatatagca tatcatcacc
251 ccttggagac tgacactctc ttcattaaag ttcacaagca tataccagag
301 ttttgtcact ccttcctatc acaccttcta ggaggtgaag atgatgacaa
351 tgctctgata gacattggcc tgttcttcaa catcttgcaa ccctctctgg
401 gcggttggat aaccaagaat tttcttagac acccaaacag gatgtctaag
451 gaccaaatta aaatgctact ggatcagatt ataaagatgg ctaaggcaga
501 gagctcagac acagaagagt atgagaaagt gtggaagaag atgccaactt
551 attttgagtc aatcatccaa cctcttctac acaaaacata gtttattgca
601 tatcatatag tcccacctac gagtgcttgc attctaggag tgaagccaga
651 ttgggctgac ctgctaatat aaaaatataa gtatattata gtttaagaga
701 tatacacgat gtttgttcac ttgagcttgg cagtttgcaa gtaattgtgt
751 gtaattgtgc ataaatatat atatatgtca atatataact atacataggt
801 gtacagatgt aaacacttga aacaaatata cacctttcaa cttatataca
851 cgcttgtaag tcttggttct tcttaacaca aacatggaaa catgagagta
901 tcaattagaa ctgccttggt gttataagca cagatatagc tgtgtgtaga
951 gaacactcaa ggctaagaat tctctaacat cgctttatac aaaaaccatt
1001 ataaaaatac taacaacttt gttttcacaa tgttaacgct aaaaactgaa
1051 ataccaaaaa catgagaaaa tagaaaatca aaaacaatga atggtgctaa
1101 gcaccacatc cggatgtggt gcgtagcacc attttcatag tgttgatcta
1151 taacctactt gtagcataga cacccatatt catgaagtgc atagcactct
1201 cttatggatt gcctactatg attacatgaa tgcatagcat cctcatggaa
1251 aaaatcagag cagaacagac cacatcagat gcttagcacc agatgttagc
1301 acaccctgga gctagttatc tcacttacat gataacagaa acttcagatt
1351 ttgatttctt tgtgatgggg atcttctttg gctgcttcac cacaccgaac
1401 tccttttcag tgtctagctc agggaagctc ttgctggtga aagcaccgcc
1451 aacagctttc tgaacgacat tagtcgtgaa attactgaag ctagacaaat
1501 gatttattgc cttatcttct agtggttcaa actcaaacat cacggtgtca
1551 ctggtcttca tggatactgg cagatcagtt ctttcaatcc cccagaacca
1601 aagagttcta gagatgacac agttctgcac tgagctgtca tcaacagaca
1651 cagacacctg aagattatgc ttatcctcta aagccagaaa attcgctaga
1701 gaacccaaga cggcaaaatt cttgctaatc gggtagcgaa cctctacctc
1751 aacttgatct gaggggttca cataggactt gtctattatg cggagagtag
1801 ttactccact agctctaccc ttgattccaa tccagaccat agcaaaagta
1851 gccactctga agaatggata atgagtgaga ggttgatgaa accaacatgg
1901 gtcaacaagt atgttgaaag ttgccttcct atgtgccttc actgaatagt
1951 cctgtttggc tatgaacata tcatacttgt tcaccttgac atctgagaag
2001 ctgaaaggct ccaatccgag cattgtagca gcctggtcaa ttgtgaccct
2051 accctggttc agaggcctct tggagagagc tagagatttc ctattcttat
2101 tatcaactct cttttgagac tcctcactaa ggtcatcata gagtacctta
2151 ctttttgaag tggacaaaag tcgagacaaa gccataatta aattatatat
2201 tagcttaatc tcaaaagata tgccctgact ttgtgt