Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, genomic RNA, isolate RY23 Mdu

ACC No: AJ884703

Dated: 2005-04-15 | Length: 881 | CRC: 1261281051

                !!NA_SEQUENCE 1.0
ID   AJ884703   standard; genomic RNA; VRL; 881 BP.
XX
AC   AJ884703;
XX
SV   AJ884703.1
XX
DT   23-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Rice yellow mottle virus CP gene for coat protein, genomic RNA, isolate
DE   RY23 Mdu
XX
KW   coat protein; CP gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-881
RA   Winter S.;
RT   ;
RL   Submitted (14-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Winter S., Plant Virus Division, DSMZ, c/o BBA, Messeweg 11/12, 38104,
RL   GERMANY.
XX
RN   [2]
RX   PUBMED; 15230480.
RA   Banwo O.O., Winter S., Koerbler M., Abdallah R.S., Makundi R.H.;
RT   "Molecular variability and distribution of Rice yellow mottle virus
RT   isolates in Tanzania";
RL   Acta Virol. 48(1):69-71(2004).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .881
FT                   /country="Tanzania:Shinyanga"
FT                   /db_xref="taxon:31744"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="RY23 Mdu"
FT                   /specific_host="Oryza sativa (rice)"
FT   CDS             6. .725
FT                   /db_xref="UniProt/TrEMBL:Q5DUE4"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAI56732.1"
FT                   /translation="MARKGKKINSNQNQQGKKNRRPRGRSVEPRLQRAPVAQASRISGM
FT                   VPGPLSSNVWPVNRSVEFLMDFKRSATSVDATIFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVVYLPEVSAATAGSIEMCYLYDYADTVPSDTGKMSRTAGFVTSSVWYGAEGCHLLTGG
FT                   SARNAVVASMDCSRVDWKRVTSSIPSDVDPNVVNTILPARLAVRSSIKPAVDDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 881 BP; 200 A; 227 C; 251 G; 203 T; 0 other;

 AJ884703  Length: 881  April 19, 2005 08:51  Type: N  Check: 8458  ..

       1  ttaagatggc caggaagggc aagaaaatca actccaacca aaaccagcaa
      51  ggcaagaaga accgacgtcc tcgtgggcgt tcggtggagc cccggcttca
     101  acgggctcca gtggctcagg cctcccggat atctgggatg gttcctggtc
     151  cactatcttc taacgtctgg ccggttaacc gctccgtgga attcctcatg
     201  gattttaaac ggagcgccac ctcggtagat gcgaccatat tcaactgtgt
     251  gccgtttaat ctaccccgag tgtggagtct tgcacgttgt tactccttgt
     301  ggaagccaac aaggtgggat gttgtctacc tccccgaggt cagtgcggca
     351  acggctggaa gtatcgagat gtgttatctc tacgactatg ccgacacagt
     401  cccaagtgac acgggtaaga tgagcaggac ggcgggcttc gtcacctcta
     451  gcgtttggta cggcgcagag ggctgccatt tgttaactgg cggctcagca
     501  cgcaatgccg tggtcgcctc gatggattgt tcccgagtcg attggaaacg
     551  cgttactagt tcaatcccta gtgacgtgga tcccaacgtc gtaaacacca
     601  tactgccagc taggctagct gtgcggtcgt cgattaaacc ggcggttgat
     651  gatacaccag gcaagctgta tgctatcgtc agtatggtcc tgcgggatcc
     701  agttgaccca acacttaaca cgtgaagctg gatctggtgg agataggtgt
     751  tagtatcagt catgaccaac ggactggctc agagatcgac taccctgaaa
     801  aggatgttga gcgtttgcga acgcgagctt tgtcctaaga gggcatgctg
     851  gtacctgtcc catgtgggga atggcaccca c