Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate Ma9

ACC No: AJ885131

Dated: 2005-06-23 | Length: 720 | CRC: 852856424

                !!NA_SEQUENCE 1.0
ID   AJ885131   standard; mRNA; VRL; 720 BP.
XX
AC   AJ885131;
XX
SV   AJ885131.1
XX
DT   23-JUN-2005 (Rel. 84, Created)
DT   23-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate Ma9
XX
KW   coat protein; cp gene; ORF4.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (17-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Dgpc, Ird, BP64501, 34394 Montpellier cedex 5, FRANCE.
XX
RN   [2]
RA   Traore O., Sorho F., Pinel A., Abubakar Z.;
RT   "Processes of diversification and dispersion of Rice yellow mottle virus
RT   inferred from large-scale and high resolution phylogeographic studies";
RL   Mol. Ecol. 0:0-0(0).
XX
RN   [3]
RA   Traore O., Sorho F., Pinel A., Abubakar Z., Banwo O., Maley J., Hebrard E.,
RA   Winter S., Sere Y., Konate G., Fargette D.;
RT   "Processes of diversification and dispersion of Rice yellow mottle virus
RT   inferred from large-scale and high resolution phylogeographic studies";
RL   Mol. Ecol. 14(7):2097-2110(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Mali"
FT                   /db_xref="taxon:31744"
FT                   /mol_type="mRNA"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ma9"
FT   CDS             1. .720
FT                   /evidence=EXPERIMENTAL
FT                   /note="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CAI59678.1"
FT                   /translation="MARKGKKINSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSNTWPLHSVEFLADFKRSATSADATTYNCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSAAAAGSIEMCYLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSGADPNVVNTILPARLAVRSSIKPTADDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 155 A; 204 C; 214 G; 147 T; 0 other;

  AJ885131  Length: 720  June 28, 2005 08:34  Type: N  Check: 5208  ..

       1  atggccagga agggcaagaa aatcaactcc aaccaggggc agcaagggaa
      51  gaagaagagc cgacgcccac gtgggcgttc ggcggaaccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggtcca
     151  ctatcttcta acacctggcc gctccactcc gtggaattcc tagcggattt
     201  taagcggagt gccacctcag cagatgcgac gacatacaac tgtgtgccgt
     251  ttaatctgcc ccgagtgtgg agtcttgcgc gttgttactc catgtggaag
     301  ccaacacggt gggacgtcgt ttacctccct gaggtgagcg cggcggcagc
     351  tggaagtatc gagatgtgtt atctctacga ctacgctgac accatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctccagcgtt
     451  tggtacggcg cggagggctg ccacttactg agtggcggct cagcacggaa
     501  tgccgtggtc gcctcgatgg actgttcccg agtcggctgg aaacgcgtta
     551  ctagttctat ccctagtggc gcggatccca acgtcgtaaa caccatactg
     601  ccagctaggc tagctgtgcg gtcgtcgatt aaaccgacgg ctgatgatac
     651  gccggggaaa ctctacgcta tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga