Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate To1

ACC No: AJ885166

Dated: 2005-06-23 | Length: 720 | CRC: 789466087

                !!NA_SEQUENCE 1.0
ID   AJ885166   standard; mRNA; VRL; 720 BP.
XX
AC   AJ885166;
XX
SV   AJ885166.1
XX
DT   23-JUN-2005 (Rel. 84, Created)
DT   23-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate To1
XX
KW   coat protein; cp gene; ORF4.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (17-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Dgpc, Ird, BP64501, 34394 Montpellier cedex 5, FRANCE.
XX
RN   [2]
RA   Traore O., Sorho F., Pinel A., Abubakar Z.;
RT   "Processes of diversification and dispersion of Rice yellow mottle virus
RT   inferred from large-scale and high resolution phylogeographic studies";
RL   Mol. Ecol. 0:0-0(0).
XX
RN   [3]
RA   Traore O., Sorho F., Pinel A., Abubakar Z., Banwo O., Maley J., Hebrard E.,
RA   Winter S., Sere Y., Konate G., Fargette D.;
RT   "Processes of diversification and dispersion of Rice yellow mottle virus
RT   inferred from large-scale and high resolution phylogeographic studies";
RL   Mol. Ecol. 14(7):2097-2110(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Togo"
FT                   /db_xref="taxon:31744"
FT                   /mol_type="mRNA"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="To1"
FT   CDS             1. .720
FT                   /evidence=EXPERIMENTAL
FT                   /note="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CAI59713.1"
FT                   /translation="MARKGKKTNSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   MVPGPLSSNTWPLHSVEFLADFKRSSTSADATTYNCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSATVAGSIEMCFLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 157 A; 193 C; 211 G; 159 T; 0 other;

  AJ885166  Length: 720  June 28, 2005 08:34  Type: N  Check: 9860  ..

       1  atggccagga agggcaagaa aaccaactcc aaccaggggc agcaaggaaa
      51  gaagaagagc cgacgcccgc gtgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggatggt tcctggtcca
     151  ctatcctcta acacctggcc gctccactcc gttgagttcc ttgcggactt
     201  caagcggagt tccacatcgg cggatgcgac gacatacaat tgtgtgccgt
     251  ttaatctgcc tcgggtgtgg agtcttgcac gttgttactc gatgtggaag
     301  ccaacacggt gggatgttgt ctacctcccg gaggttagtg caacagttgc
     351  tgggagtatc gagatgtgtt ttctctacga ctatgctgac acaatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctccagcgtt
     451  tggtacggcg cggagggctg ccacttatta agtggtggct cagcacgaaa
     501  tgccgtggtc gcctcgatgg actgttctcg agtcggctgg aaacgcgtta
     551  ctagttctat tcctagtagc gtggatccca acgtcgtaaa caccatactg
     601  ccagcaaggc tagctgtgcg atcgtcgatc aaaccgacgg ttgacgatac
     651  gccggggaaa ctctatgcta tcgttagtat ggtcctgcgg gacccggttg
     701  atccaacact caatacgtga