Sequence of DPV Alternanthera yellow vein virus
Alternanthera yellow vein virus, complete genome, isolate G38
ACC No: AJ965540
Dated: 2006-04-27 | Length: 2745 | CRC: 1103836648
ID AJ965540 standard; circular genomic DNA; VRL; 2745 BP.
XX
AC AJ965540;
XX
SV AJ965540.1
XX
DT 21-JUL-2005 (Rel. 84, Created)
DT 27-APR-2006 (Rel. 87, Last updated, Version 3)
XX
DE Alternanthera yellow vein virus, complete genome, isolate G38
XX
KW ac1 gene; AC1 protein; ac2 gene; AC2 protein; ac3 gene; AC3 protein;
KW ac4 gene; AC4 protein; av2 gene; AV2 protein; cp gene; CP protein.
XX
OS Alternanthera yellow vein virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2745
RA Zhou X.;
RT ;
RL Submitted (19-APR-2005) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268, Kaixuan
RL Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN [2]
RA Huang J., Zhou X., Jiang T.;
RT "Molecular characterization of begomoviruses infecting Ludwigia
RT hyssopifolia";
RL Unpublished.
XX
RN [3]
RA Huang J., Jiang T., Zhou X.;
RT "Molecular characterization of two distinct begomoviruses infecting
RT Ludwigia hyssopifolia";
RL J. Plant Pathol. 88(1):83-88(2006).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2745
FT /organism="Alternanthera yellow vein virus"
FT /segment="DNA-A"
FT /specific_host="Ludwigia hyssopifolia"
FT /isolate="G38"
FT /mol_type="genomic DNA"
FT /country="China:Guangxi"
FT /virion
FT /db_xref="taxon:337826"
FT CDS 154. .501
FT /transl_table=1
FT /gene="av2"
FT /product="AV2 protein"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="UniProtKB/TrEMBL:Q4GZI9"
FT /protein_id="CAI84282.1"
FT /translation="MWDPLLNPFPQTVHAFRCMLSVKYLQAVEDTYAPDTLGADLIREL
FT IAVIRANNYVEACSRYDHFIKRVEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVEPPHVS
FT QAKVVPNVQKP"
FT CDS 314. .1084
FT /transl_table=1
FT /gene="cp"
FT /product="CP protein"
FT /db_xref="GOA:Q4GZI8"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q4GZI8"
FT /protein_id="CAI84283.1"
FT /translation="MSKRAADMIISSSGSRVRRRLNFDSPMARRATAPIVRATRKQQWS
FT SRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGSGITHR
FT VGKRFCIKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEP
FT STATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENH
FT TENALVLYMACTHASNPVYATLKIRIYFYDSVMN"
FT CDS complement(1081. .1485)
FT /transl_table=1
FT /gene="ac3"
FT /product="AC3 protein"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:Q4GZI7"
FT /protein_id="CAI84284.1"
FT /translation="MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRPFLREHDI
FT ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNN
FT VIRAINHVLWNALHNTLYVNFNHIIKFNIY"
FT CDS complement(1226. .1630)
FT /transl_table=1
FT /gene="ac2"
FT /product="AC2 protein"
FT /db_xref="GOA:Q4GZI6"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:Q4GZI6"
FT /protein_id="CAI84285.1"
FT /translation="MRPSSPSTSRCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISID
FT CHNYGFTHRGIHHCSSGREWRVYLGNNQSPIFQDHQTRQQTIPTGTRHHYSSDTVQLQP
FT AEGFGDTQMFSDLPDLDSLTTSDIEFLKGL"
FT CDS complement(1533. .2618)
FT /transl_table=1
FT /gene="ac1"
FT /product="AC1 protein"
FT /db_xref="GOA:Q4GZI5"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q4GZI5"
FT /protein_id="CAI84286.1"
FT /translation="MRQPGRFRLNRKNFFLTYSQCPISKEEALEQLLNIQTPVNKKFIR
FT VCRELHEDGNPHLHALVQFEGKFDLTNPRFFDLQSPNSSSQYHCFITDAKSSSDVKAYI
FT EKDGDILDWGTFQIDGRSARGGQQTANDAYARAINTGNKDQALDVIKELAPKDYVLQFH
FT NLNANLERIFMPPIEEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHIDLSPRVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWAIKNATFVTINQPL
FT YSGSHQSPTQASQEETSQTEG"
FT CDS complement(2171. .2461)
FT /transl_table=1
FT /gene="ac4"
FT /product="AC4 protein"
FT /db_xref="UniProtKB/TrEMBL:Q4GZI4"
FT /protein_id="CAI84287.1"
FT /translation="METLISMLLCNSRASSTSRIRDSSTYSHPTPPPNTTASSPMLSPV
FT QTLRHTSRRTGTYLTGAPSRLMEDLQEGDNRQQTMLTQEQLTQAIRIKLLM"
XX
SQ Sequence 2745 BP; 707 A; 573 C; 631 G; 834 T; 0 other;
aj965540 Length: 2745 27-APR-2006 Type: N Check: 4838 ..
1 accgatggcc aaaaaaaaat ttatgccggg cccacctggc agcttttgtc
51 tgccactaga caatcccgtc caatcagaat tcagcctcaa agcttaaata
101 aaattggcgc ccgctttaaa tgcttggccg ctacgtttag tgcgctgtcc
151 actatgtggg atccgctttt gaacccgttt ccccagaccg tgcacgcctt
201 tcgttgcatg ctttctgtaa agtatttaca ggccgttgaa gacacatacg
251 ctcctgatac tttaggcgct gatttaatta gggagttaat tgcagtaatt
301 agggcaaata attatgtcga agcgtgcagc agatatgatc atttcatcaa
351 gcgggtcgag ggtacgacgt cggctcaact tcgacagccc tatggctcgc
401 cgtgctactg cccccattgt ccgtgccact cgaaaacagc agtggtcgag
451 ccgccccatg tatcgcaagc caaggttgta ccgaatgtac agaagccctg
501 atgtgcctta tggctgtgag ggtccgtgta aggtccagtc atttgaaaaa
551 aaacatgacg ttagtcatac tggcacgttg ttgtgtgttt ctgatgttac
601 cagaggtagt gggattactc atagagtagg gaagcgtttc tgcatcaagt
651 caatatacat catagggaag atatggatgg acgagaacat taagtccaag
701 aatcatacta acacggttat gttctggtta gttagggatc gccgcccagt
751 tacaacgcct tatggctttg gtgaggcgtt taatatgtat gacaatgagc
801 cctctacagc cactatcaag aacgatctgc gtgatcgttt gcaggtgtta
851 cacaggtttt ctgccacagt tactgggggt cagtatgcgt ctaaggaaca
901 ggctatgatc aagcgtttct ggaggattaa caaccatgtg gtctacaacc
951 atcaggagaa ggcagcttat gaaaatcata ctgagaatgc cttagttttg
1001 tatatggctt gtactcatgc tagcaatcct gtgtatgcta cgctgaaaat
1051 tagaatatat ttctacgact ctgtaatgaa ttaataaata ttgaatttta
1101 ttatatgatt gaagtttaca tacaacgtat tgtgcaatgc attccatagt
1151 acatgattta ttgctctaat tacattgtta agacaaatta caccaagatt
1201 atctaaatac ttcataactt gggtcttaaa gacccttaag aaactcaatg
1251 tctgaggttg taagcgagtc cagatctggc aagtcagaaa acatttgtgt
1301 atccccaaag ccttccgcag gttgtagttg aactgtatct gaactgtaat
1351 gatgtcgtgt tcccgtagga atggtctgct gtcgtgtttg atgatcttga
1401 aatatagggg attggttatt tcccaggtat acacgccatt ctctgcctga
1451 gctgcagtga tgtattcccc tgtgcgtgaa tccatagttg tgacagtcaa
1501 tggagatgta tagtgaacag ccgcaacgca gatcaaccct ccgtctgcga
1551 ggtttcctct tggctagcct gtgttggact ttgatgggaa cctgagtaca
1601 gcggctggtt gatggtgacg aaggtcgcat tctttatggc ccagtttttt
1651 agacctatgt ttttctcctc atcaaggaac tctttatagg aggatgttgg
1701 accaggattg cagaggaaga ttgttgggat cccgccttta atttgaacgg
1751 gcttcccgta ttttgtattg gactgccaat ccctttgggc ccccatgaat
1801 tccttgaaat gttttacata gtgaggatca acatcgtcta ttatgttata
1851 ccaggcttcg ttgctgtaaa ccctaggact aaggtcaata tgaccgcata
1901 agtaattatg tggacctaat gatctagccc acatggtttt cccagtcctg
1951 ctgtcacctt ctataactat acttattggt ctccatggcc gcgcagcggc
2001 agacattaca ttgtctgcgg cccattcttc aatctcttca gggacttgat
2051 caaacgatga acaattaaat ggactaatgt actcttcaat aggaggcatg
2101 aaaatgcgtt ccagattagc atttaaatta tgaaattgta atacatagtc
2151 cttaggagct aactccttaa ttacatcaag agcttgatcc ttattgcctg
2201 tgttaattgc tcttgcgtaa gcatcgtttg ctgtctgttg tccccctctt
2251 gcagatcttc catcaatctg gaaggtgccc cagtcaagta tgtccccgtc
2301 cttctcgatg tatgccttaa cgtctgaact ggacttagca tcggtgatga
2351 agcagtggta ttgggaggag gagttgggtg actgtaagtc gaagaatctc
2401 ggattcgtga ggtcgaactt gccctcgaat tgcacaagag catggagatg
2451 agggtttcca tcctcgtgta gttctctaca aaccctaatg aatttcttgt
2501 ttacaggggt ttgtatattg agtaattgtt ctagtgcctc ttctttagag
2551 atagggcact gtgagtaagt gaggaagaag ttcttcctat ttaatctgaa
2601 tctcccaggc tgacgcatga tgacgtatgt atcccccgat tggagctctc
2651 ttcaaacttc ctagtcaatg ggtggatagg tggatgttat atagtgggga
2701 tttttccgga ataaaaaatt tttttttggc catcgcaata atatt