Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp2 gene (partial), TGBp3 gene and CP gene (partial), genomic RNA, isolate Mu 04.8
ACC No: AM040183
Dated: 2005-10-20 | Length: 982 | CRC: 715312319
!!NA_SEQUENCE 1.0
ID AM040183 standard; genomic RNA; VRL; 982 BP.
XX
AC AM040183;
XX
SV AM040183.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp2 gene (partial), TGBp3 gene and CP gene (partial),
DE genomic RNA, isolate Mu 04.8
XX
KW coat protein; CP gene; TGBp2 gene; TGBp3 gene; triple gene block protein 2;
KW triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-982
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .982
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /isolate="Mu 04.8"
FT /specific_host="Lycopersicon esculentum"
FT CDS <1. .354
FT /codon_start=1
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ04663.1"
FT /translation="RADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRLPFGGQY
FT QDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQHSCYNTH
FT SATNNTQPLSGHH"
FT CDS 206. .460
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ04674.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPQLEN"
FT CDS 499. .>982
FT /gene="CP"
FT /product="coat protein"
FT /protein_id="CAJ04678.1"
FT /translation="MPDTTPVAFTSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAA"
XX
SQ Sequence 982 BP; 284 A; 264 C; 167 G; 267 T; 0 other;
AM040183 Length: 982 November 1, 2005 08:46 Type: N Check: 1497 ..
1 agagctgacc tcactgacac atacaaaatc attgccattg ctttcttgtt
51 gtcagcttgc atttacttcc aaaatagcca ctaccaacct gttgctggag
101 acaacttgca ccgtttgcct tttggtggcc aatatcaaga cggcaccaaa
151 aagatatctt attttccaca acagcagtca tactttcatt ctggaaacaa
201 attaaatgtc ctcatactta tcttcattct cacattgggt attgtcctca
251 ccaataaatt tagttttagc tttagtcgta ctactcacca gcattcttgc
301 tataacacac attcagcaac caacaataca caaccattgt caggtcacca
351 ttgacggtgc tgcaatagtc ataacaaatt gtgagaacac accagaagtg
401 cttaaagcaa tcaacttctc cccttggaac gggttaagtt ttcctcaatt
451 ggaaaattaa tattgagtgc tcacataatt caacctcaac aaacaatcat
501 gcctgacaca acacctgttg ctttcacttc aagtgcacca cccacagcca
551 aagatgctgg tgccaaagct ccttctgact tctcaaatcc caatacagct
601 cctagtctca gtgatttgaa gaaagtcaag tatgtctcca ccgtgacctc
651 cgtggccaca ccagctgaaa ttgaagccct aggcaaaatc ttcactgcca
701 tgggccttgc cgccaatgag actggtccgg ccatgtggga tctagctcgt
751 gcatatgctg atgtgcagag ttctaaatcg gcacagctga ttggagctac
801 cccttccaac cctgcactat cacgccgagc ccttgctgct cagtttgatc
851 gaatcaatat aacccccagg caattttgca tgtactttgc caaagttgtt
901 tggaacatac ttctcgacag caacattcca ccagcaaatt gggccaaact
951 tggttaccaa gaagatacaa aatttgctgc tg