Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone CI 00.1 TGB, isolate 1
ACC No: AM041935
Dated: 2005-10-20 | Length: 1266 | CRC: -1332487659
!!NA_SEQUENCE 1.0
ID AM041935 standard; genomic RNA; VRL; 1266 BP.
XX
AC AM041935;
XX
SV AM041935.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone CI 00.1
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1266
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1266
FT /country="Spain:Canary Islands"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="CI 00.1 TGB"
FT CDS 47. .751
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14208.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT TYVERLRVPHYTSFRTHRFGKSTAEILNKLSDLNIISVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 732. .1103
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14209.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKRISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQPLSGHH"
FT CDS 955. .1209
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14210.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTTHNHC
FT QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1266 BP; 387 A; 302 C; 207 G; 370 T; 0 other;
AM041935 Length: 1266 November 1, 2005 08:47 Type: N Check: 8648 ..
1 ccctccaaat caacacattg aggggttaag tttttcccag ttggaaatgg
51 aaagatcaac tctgattaat ttacttcaat tgcaccactt cgagccaaaa
101 ctcagtgttg aaggaatcat agttgtgcac ggaattgcag gaactgggaa
151 aaccacttta cttaggactt tattttctgc ttaccctagc ttagttatag
201 gttcacctag gccttgttat ttagacaaac aaaataaaat ttcacaagtt
251 tgcttatctt gctttcccaa tacccattgt gacattgttg atgagtatca
301 tttgctagaa agtttcccag aaccaaaatt ggctatcttt ggtgacccct
351 gtcaatgcac atacgttgag agacttagag tcccacatta cacttccttc
401 agaactcata gatttggaaa gtcaactgct gagattttga acaaactgtc
451 tgaccttaat ataatctcag ttaagaaaga agacgacatt gttgaattct
501 ttaacccttt cgaagttgac cccactgaac atatctcagc ctctgaagag
551 gaagtcttag actttgtttc tgaccaagtg gtgaccacca gctcagagga
601 actagcagga cttgaatttg ctgaaacaac tttctactgc accacactgg
651 cagcagccgt tgctgaaaat cctgctaaga ctttcatctc tctgaccaga
701 cacactcaca aactcaccat tggggaacta aatgccaggt ctaactccta
751 gagctgacct cactgacaca tacaaaatca ttgccattgc cttcttgttg
801 tcagcctgca tttacttcca aaatagccac taccaacctg ttgctggaga
851 caatttgcac cgtttgcctt ttggtggcca atatcaagac ggcactaaaa
901 ggatttctta ttttccacaa cagcagtcat actttcattc tggaaacaaa
951 ttaaatgtcc tcatacttat cttcattctc acattgggta ttgtcctcac
1001 caataaattt agttttagct ttagtcgtac tactcaccag cattcttgct
1051 ataacacaca ttcagcaacc aacaacacac aaccattgtc aggtcatcat
1101 tgacggtgct gcaatagtca taacaaattg tgagaacaca ccagaagtac
1151 ttaaggcaat caacttctcc ccctggaacg ggttaagttt tcctaagttt
1201 gaaaattaat attgagtgtt cacaacaatc aacttcaaca aacaatcatg
1251 cctgacacaa cacctg