Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 01.6 TGB, isolate 1
ACC No: AM041941
Dated: 2005-10-20 | Length: 1269 | CRC: 1871592004
!!NA_SEQUENCE 1.0
ID AM041941 standard; genomic RNA; VRL; 1269 BP.
XX
AC AM041941;
XX
SV AM041941.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 01.6
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1269
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1269
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Mu 01.6 TGB"
FT CDS 50. .754
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14226.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLTAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 735. .1106
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14227.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQPLSGHH"
FT CDS 958. .1212
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14228.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1269 BP; 392 A; 299 C; 208 G; 370 T; 0 other;
AM041941 Length: 1269 November 1, 2005 08:47 Type: N Check: 3380 ..
1 agccctccaa aagcaacaca ttgaggggtt aagttttccc cagttcgaaa
51 tggaaagatc aactctgatt aatttacttc aattgcacca cttcgagcca
101 aaactcagtg ttgaaggaat catagttgtg cacggaattg caggcactgg
151 gaaaaccact ttacttagga ctttattttc tgcttaccct agcttagtta
201 taggttcacc taggccttgc tacttagata aacaaaacaa aatttcacaa
251 gtttgcttat cttgctttcc caatacccat tgtgatattg tcgatgagta
301 tcatttgcta gaaagttttc cagaaccaaa attggctatc tttggtgacc
351 cctgtcaatg cacatacatt gagagactta gagtcccaca ttacacttcc
401 ttcagaactc atagatttgg aaagtcaact gctgagattt tgaacaaact
451 gtttgacctt aatatagtct cagttaagaa agaagacgac atcgttgaat
501 tctttaaccc ttttgaagtt gaccccactg agcatatctc tgcctctgaa
551 gaagaagtct tggacttcgt ttctgaccaa gtggtgacca ctagctcaga
601 ggaactagca ggacttgagt ttgcagaaac aactttctac tgcacaacat
651 tgaccgcagc tgttgctgaa aatccagcta agactttcat ttctctgact
701 agacacaccc acaaactcac cattggggaa ctaaatgcca ggtctaactc
751 ctagagctga cctcactgac acatacaaaa tcattgccat tgctttcttg
801 ttgtcagctt gcatttactt ccaaaatagc cactaccaac ctgttgctgg
851 agacaacttg caccgtttgc cttttggtgg ccaatatcaa gacggcacca
901 aaaagatatc ttattttcca caacagcagt catactttca ttctggaaac
951 aaattaaatg tcctcatact tatcttcatt ctcacattgg gtattgtcct
1001 caccaataaa tttagtttta gctttagtcg tactactcac cagcattctt
1051 gctataacac acattcagca accaacaata cacaaccatt gtcaggtcac
1101 cattgacggt gctgcaatag tcataacaaa ttgtgagaac acaccagaag
1151 tgcttaaagc aatcaacttc tccccttgga acgggttaag ttttcctaaa
1201 tttgaaaatt aatattgagt gttcacaaaa atcaactgca ataaacaatc
1251 atgcctgaca caacacctg