Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 01.10 TGB, isolate 1
ACC No: AM041951
Dated: 2005-10-20 | Length: 1266 | CRC: 1773985817
!!NA_SEQUENCE 1.0
ID AM041951 standard; genomic RNA; VRL; 1266 BP.
XX
AC AM041951;
XX
SV AM041951.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 01.10
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1266
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1266
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Mu 01.10 TGB"
FT CDS 47. .751
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14250.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 732. .1103
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14251.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQPLSGHH"
FT CDS 955. .1209
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14252.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1266 BP; 389 A; 298 C; 207 G; 372 T; 0 other;
AM041951 Length: 1266 November 1, 2005 08:47 Type: N Check: 25 ..
1 cctccaaaag caacacattg aggggctcag ttttccccag ttcgaaatgg
51 aaagatcaac tctgattaat ttacttcaat tgcaccactt cgagccaaaa
101 ctcagtgttg aaggaatcat agttgtgcac ggaattgcag gcactgggaa
151 aaccacttta cttaggactt tattttctgc ttaccctagc ttagttatag
201 gttcacctag accttgctat ttagataaac aaaacaaaat ttcacaagtt
251 tgcttatctt gctttcccaa tacccattgt gatattgtcg atgagtatca
301 tttgctagaa agttttccag aaccaaaatt ggctatcttt ggtgacccct
351 gtcaatgcac atacattgag agacttagag tcccacatta cacttccttc
401 agaactcata gatttggaaa gtcaactgct gagattttga acaaactgtt
451 tgaccttaat atagtctcag ttaagaaaga agacgacatc gttgaattct
501 ttaacccttt tgaagttgac cccactgagc atatttctgc ctctgaagaa
551 gaagtcttgg actttgtttc tgaccaagtg gtgaccacta gctcagagga
601 actagcagga cttgagtttg cagaaacaac tttctactgc acaacattgg
651 ccgcagctgt tgccgaaaat cctgctaaga ctttcatctc tctgactaga
701 cacacccaca aactcaccat tggggaacta aatgccaggt ctaactccta
751 gagctgacct cactgacaca tacaaaatca ttgccattgc tttcttgttg
801 tcagcttgca tttacttcca aaatagccac taccaacctg ttgctggaga
851 caacttgcac cgtttgcctt ttggtggcca atatcaagac ggcaccaaaa
901 agatatctta ttttccacaa cagcagtcat actttcattc tggaaacaaa
951 ttaaatgtcc tcatacttat cttcattctc acattgggta ttgtcctcac
1001 caataaattt agttttagct ttagtcgtac tactcaccag cattcttgct
1051 ataacacaca ttcagcaacc aacaatacac aaccattgtc aggtcaccat
1101 tgacggtgct gcaatagtca taacaaattg tgagaacaca ccagaagtgc
1151 ttaaagcaat caacttctcc ccttggaacg ggttaagttt tcctaaattt
1201 gaaaattaat attgagtgtt cacaaaaatc aacttcaata aacaatcatg
1251 cctgacacaa cagctg