Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Al 01.2 TGB, isolate 1
ACC No: AM041953
Dated: 2005-10-20 | Length: 1248 | CRC: 2060436556
!!NA_SEQUENCE 1.0
ID AM041953 standard; genomic RNA; VRL; 1248 BP.
XX
AC AM041953;
XX
SV AM041953.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Al 01.2
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1248
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1248
FT /country="Spain:Alicante"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Al 01.2 TGB"
FT CDS 48. .752
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14256.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 733. .1104
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14257.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQPLSGHH"
FT CDS 956. .1216
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14258.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFENQY"
XX
SQ Sequence 1248 BP; 385 A; 293 C; 202 G; 368 T; 0 other;
AM041953 Length: 1248 November 1, 2005 08:47 Type: N Check: 9403 ..
1 ccctccaaaa gcaacacatt aaggggttaa gttttcccca gttcgaaatg
51 gaaagatcaa ctctgattaa tttacttcaa ttgcaccact tcgagccaaa
101 actcagtgtt gaaggaatca tagttgtgca cggaattgca ggcactggga
151 aaaccacttt acttaggact ttattttctg cttaccctag cttagttata
201 ggttcaccta ggccttgcta tttagataaa caaaacaaaa tttcacaagt
251 ttgcttatct tgctttccca atacccattg tgatattgtc gatgagtatc
301 atttgctaga aagttttcca gaaccaaaat tggctatctt tggtgacccc
351 tgtcaatgca catacattga gagacttaga gtcccacatt acacttcctt
401 cagaactcat agatttggaa agtcaactgc tgagattttg aacaaactgt
451 ttgaccttaa tatagtctca gttaagaaag aagacgacat cgttgaattc
501 tttaaccctt ttgaagttga ccccactgag cacatctctg cctctgaaga
551 agaagtcttg gactttgttt ctgaccaagt ggtgaccact agctcagagg
601 aactagcagg acttgagttt gcagaaacaa ctttctactg cacaacattg
651 gccgcagctg ttgctgaaaa tcctgctaag actttcatct ctctgactag
701 acacacccac aaactcacca ttggggaact aaatgccagg tctaactcct
751 agagctgacc tcactgacac atacaaaatc attgccattg ctttcttgtt
801 gtcagcttgc atttacttcc aaaatagcca ctaccaacct gttgctggag
851 acaacttaca ccgtttgcct tttggtggcc aatatcaaga cggcaccaaa
901 aagatatctt attttccaca acagcagtca tactttcatt ctggaaacaa
951 actaaatgtc ctcatactta tcttcattct cacattgggt attgtcctca
1001 ccaataaatt tagttttagc tttagtcgta ctactcacca gcattcttgc
1051 tataacacac attcagcaac caacaataca caaccattgt caggtcacca
1101 ttgacggtgc tgcaatagtc ataacaaatt gtgagaacac accagaagtg
1151 cttaaagcaa tcaacttctc cccttggaac gggttaagtt ttcctaaatt
1201 tgaaaatcaa tattgagtgt tcacaaaaat caactttaat aaacaatc