Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 03.9 TGB, isolate 1
ACC No: AM041963
Dated: 2005-10-20 | Length: 1256 | CRC: 728971471
!!NA_SEQUENCE 1.0
ID AM041963 standard; genomic RNA; VRL; 1256 BP.
XX
AC AM041963;
XX
SV AM041963.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 03.9
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1256
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1256
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Mu 03.9 TGB"
FT CDS 37. .741
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14283.1"
FT /translation="MERSTLINLLQLHRFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFLEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDVVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 722. .1093
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14284.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVITNKFSFSLSRTTHQH
FT SCYNTHSATNNTQPLSGHH"
FT CDS 945. .1199
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14285.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1256 BP; 382 A; 292 C; 208 G; 374 T; 0 other;
AM041963 Length: 1256 November 1, 2005 08:47 Type: N Check: 9734 ..
1 caacaccatt gaggggtcag tttttcccag ttcgaaatgg aaagatcaac
51 tctgattaat ttacttcaat tgcaccgctt cgagccaaaa ctcagtgttg
101 aaggaatcat agttgtgcac ggaattgcag gcactgggaa aaccacttta
151 cttaggactt tattttctgc ttaccctagc ttagttatag gttcacctag
201 gccttgctat ttagataaac aaaacaaaat ttcacaagtt tgcttatctt
251 gctttcccaa tacccattgt gatattgtcg atgagtatca tttgctagaa
301 agttttctag aaccaaaatt ggctatcttt ggtgacccct gtcaatgcac
351 atacattgag agacttagag tcccacatta cacttccttc agaactcata
401 gatttggaaa gtcaactgct gagattttga acaaactgtt tgaccttaat
451 atagtctcag ttaagaaaga agacgacgtc gttgaattct ttaacccttt
501 tgaagttgac cccactgagc atatctctgc ctctgaagaa gaagtcttgg
551 actttgtttc tgaccaagtg gtgaccacta gctcagagga actagccgga
601 cttgagtttg cagaaacaac tttctactgc acaacattgg ccgcagctgt
651 tgctgaaaat cctgctaaga ctttcatctc tctgactaga cacacccaca
701 aactcaccat tggggaacta aatgccaggt ctaactccta gagctgacct
751 cactgacaca tacaaaatca ttgccattgc tttcttgttg tcagcttgca
801 tttacttcca aaatagccac taccaacctg ttgctggaga caacttgcac
851 cgtttgcctt ttggtggcca atatcaagac ggcaccaaaa agatatctta
901 ttttccacaa cagcagtcat actttcattc tggaaacaaa ttaaatgtcc
951 tcatacttat cttcattctc acattgggta ttgtcatcac caataaattt
1001 agttttagcc ttagtcgtac tactcaccag cattcttgct ataacacaca
1051 ttcagcaacc aacaatacac aaccattgtc aggtcatcat tgacggtgct
1101 gcaatagtca taacaaattg tgagaacaca ccagaagtgc ttaaagcaat
1151 caacttctcc ccttggaacg ggttaagttt tcctaaattt gaaaattaat
1201 attgagtgtt cacaaaaatc aacttcaata aacaattatg cctgacacaa
1251 cacctg