Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.11 TGB, isolate 1
ACC No: AM041983
Dated: 2005-10-20 | Length: 1267 | CRC: 621715659
!!NA_SEQUENCE 1.0
ID AM041983 standard; genomic RNA; VRL; 1267 BP.
XX
AC AM041983;
XX
SV AM041983.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.11
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1267
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1267
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Mu 04.11 TGB"
FT CDS 49. .753
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14343.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFLEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENSAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 734. .1105
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14344.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQPMSGHH"
FT CDS 957. .1211
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14345.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNQC
FT QVIIDGAAIFITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1267 BP; 392 A; 293 C; 206 G; 376 T; 0 other;
AM041983 Length: 1267 November 1, 2005 08:47 Type: N Check: 9324 ..
1 agccctccaa aagcaacaca ttgaggggtt aagttttccc agttcgaaat
51 ggaaagatca actctgatta atttacttca attgcaccac ttcgagccaa
101 aactcagtgt tgaaggaatc atagttgtgc acggaattgc aggcactggg
151 aaaaccactt tacttaggac tttattttct gcttacccta gcttagttat
201 aggttcacct aggccttgct atttagataa acaaaacaaa atttcacaag
251 tttgcttatc ttgctttccc aatacccatt gtgatattgt cgatgagtat
301 catttgctag aaagttttct agaaccaaaa ttggctatct ttggtgaccc
351 ctgtcaatgc acatacattg agagacttag agtcccacat tacacttcct
401 tcagaactca tagatttgga aagtcaactg ctgagatttt gaacaaactg
451 tttgacctta atatagtctc agttaagaaa gaagacgaca tagttgaatt
501 ctttaaccct tttgaagttg accccactga gcatatctct gcctctgaag
551 aagaagtctt ggactttgtt tctgaccaag tggtgaccac tagctcagag
601 gaactagcag gacttgagtt tgcagaaaca actttctact gcacaacatt
651 ggccgcagct gttgctgaaa attctgctaa gactttcatc tctctgacta
701 gacacaccca caaactcacc attggggaac taaatgccag gtctaactcc
751 tagagctgac ctcactgaca catacaaaat tattgccatt gctttcttgt
801 tgtcagcttg catttacttc caaaatagcc actaccaacc tgttgctgga
851 gacaacttgc accgtttgcc ttttggtggc caatatcaag acggcaccaa
901 aaagatatcc tattttccac aacaacagtc atactttcat tctggaaaca
951 aattaaatgt cctcatactt atcttcattc tcacattggg tattgtcctc
1001 accaataaat ttagttttag ctttagtcgt actactcacc agcattcttg
1051 ctataacaca cattcagcaa ccaacaatac acaaccaatg tcaggtcatc
1101 attgacggtg ctgcaatatt cataacaaat tgtgagaaca caccagaagt
1151 gcttaaagca atcaacttct ccccttggaa cgggttaagt tttcctaaat
1201 ttgaaaatta atattgagtg ttcacaaaat caacttcaat aaacaatcat
1251 gcctgacaca acacctg