Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.13 TGB, isolate 1
ACC No: AM041985
Dated: 2005-10-20 | Length: 1265 | CRC: -601742668
!!NA_SEQUENCE 1.0
ID AM041985 standard; genomic RNA; VRL; 1265 BP.
XX
AC AM041985;
XX
SV AM041985.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.13
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1265
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1265
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Mu 04.13 TGB"
FT CDS 47. .751
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14349.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFLEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 732. .1103
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14350.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQSLSGHH"
FT CDS 955. .1209
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14351.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAIIHIQQPTIHNHC
FT QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1265 BP; 388 A; 293 C; 207 G; 377 T; 0 other;
AM041985 Length: 1265 November 1, 2005 08:47 Type: N Check: 1987 ..
1 cctccaaaag caacacattg aggggttaag ttttccccag ttcgaaatgg
51 aaagatcaac tctgattaat ttacttcaat tgcaccactt tgagccaaaa
101 ctcagtgttg aaggaatcat agttgtgcac ggaattgcag gcactgggaa
151 aaccacttta cttaggactt tattttctgc ttaccctagc ttagttatag
201 gttcacctag gccttgctat ttagataaac aaaacaaaat ttcacaagtt
251 tgcttatctt gctttcccaa tacccattgt gatattgtcg atgagtatca
301 tttgctagaa agttttctag aaccaaaact ggctatcttt ggtgacccct
351 gtcaatgcac atacattgag agacttagag tcccacatta cacttccttc
401 agaactcata gatttggaaa gtcaactgct gagattttga acaaactgtt
451 tgaccttaat atagtctcag ttaagaaaga agacgacatc gttgaattct
501 ttaacccttt tgaagttgac cccactgagc atatctctgc ctctgaagaa
551 gaagtcttgg actttgtttc tgaccaagtg gtgaccacta gctcagagga
601 actagcagga cttgagtttg cagaaacaac tttctactgc acaacattgg
651 ccgcagctgt tgctgaaaat cctgctaaga ctttcatctc tctgactaga
701 cacacccaca aactcaccat tggggaacta aatgccaggt ctaactccta
751 gagctgacct cactgacaca tacaaaatca ttgccattgc tttcttgttg
801 tcagcttgca tttacttcca aaatagccac taccaacctg ttgctggaga
851 caacttgcac cgtttgcctt ttggtggcca atatcaagac ggcaccaaaa
901 agatatctta ttttccacaa cagcagtcat actttcattc tggaaacaaa
951 ttaaatgtcc tcatacttat cttcattctc acattgggta ttgtcctcac
1001 caataaattt agttttagct ttagtcgtac tactcaccag cattcttgct
1051 ataatacaca ttcagcaacc aacaatacac aatcattgtc aggtcatcat
1101 tgacggtgct gcaatagtca taacaaattg tgagaacaca ccagaagtgc
1151 ttaaagcaat caacttctcc ccttggaacg ggttaagttt tcctaaattt
1201 gaaaattaat attgagtgtt cacaaaatca acttcaataa acaatcatgc
1251 ctgacacaac acctg