Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.18 TGB, isolate 1
ACC No: AM041990
Dated: 2005-10-20 | Length: 1272 | CRC: 1164890333
!!NA_SEQUENCE 1.0
ID AM041990 standard; genomic RNA; VRL; 1272 BP.
XX
AC AM041990;
XX
SV AM041990.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.18
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1272
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1272
FT /country="Spain:Murcia"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Mu 04.18 TGB"
FT CDS 53. .757
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14364.1"
FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVATTSSGELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 738. .1109
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14365.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSATNNTQPLSGHH"
FT CDS 961. .1215
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14366.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFTKFEN"
XX
SQ Sequence 1272 BP; 392 A; 298 C; 210 G; 372 T; 0 other;
AM041990 Length: 1272 November 1, 2005 08:47 Type: N Check: 7578 ..
1 agccctccaa aagcaacaca ttgaggggtt aagttttccc cagattcgcg
51 aaatggaaag atcaactctg attaatttac ttcaattgca ccacttcgag
101 ccaaaactca gtgttgaagg aatcatagtt gtgcacggaa ttgcaggcac
151 ggggaaaacc actttactta ggactttatt ttctgcttac cctagcttag
201 ttataggttc acctaggcct tgctatttag ataaacaaaa caaaatttca
251 caagtttgct tatcttgctt tcccaatacc cattgtgata ttgtcgatga
301 gtatcatttg ctagaaagtt ttccagaacc aaaattggct atctttggtg
351 acccctgtca atgcacatac attgagagac ttagagtccc acattacact
401 tccttcagaa ctcatagatt tggaaagtca actgctgaga ttttgaacaa
451 actgtttgac cttaatatag tctcagttaa gaaagaagac gacatcgttg
501 aattctttaa cccttttgaa gttgacccca ctgagcatat ctctgcctct
551 gaagaagaag tcttggactt tgtttctgac caagtggcga ccactagctc
601 aggagaacta gcaggacttg agtttgcaga aacaactttt tactgcacaa
651 cattggccgc agctgttgct gaaaatcctg ctaagacttt catctctctg
701 actagacaca cccacaaact caccattggg gaactaaatg ccaggtctaa
751 ctcctagagc tgacctcact gacacataca aaatcattgc cattgctttc
801 ttgttgtcag cttgcattta cttccaaaat agccactacc aacctgttgc
851 tggagacaac ttgcaccgtt tgccttttgg tggccaatat caagacggca
901 ccaaaaagat atcttatttt ccacaacagc agtcatactt tcattctgga
951 aacaaattaa atgtcctcat acttatcttc attctcacat tgggtattgt
1001 cctcaccaat aaatttagtt ttagctttag tcgtactact caccagcatt
1051 cttgctataa cacacattca gcaaccaaca atacacaacc attgtcaggt
1101 caccattgac ggtgctgcaa tagtcataac aaattgtgag aacacaccag
1151 aagtgcttaa agcaatcaac ttctcccctt ggaacgggtt aagttttact
1201 aaatttgaaa attaatattg agtgttcaca aaaatcaact tcaataaaca
1251 atcatgcctg acacaacacc tg