Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Na 04.1 TGB, isolate 1
ACC No: AM041992
Dated: 2005-10-20 | Length: 1270 | CRC: 270712847
!!NA_SEQUENCE 1.0
ID AM041992 standard; genomic RNA; VRL; 1270 BP.
XX
AC AM041992;
XX
SV AM041992.1
XX
DT 20-OCT-2005 (Rel. 85, Created)
DT 20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Na 04.1
DE TGB, isolate 1
XX
KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW triple gene block protein 2; triple gene block protein 3.
XX
OS Pepino mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-1270
RA Pagan I.;
RT ;
RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL Madrid, 28040, SPAIN.
XX
RN [2]
RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA Jorda C., Garcia-Arenal F.;
RT "Genetic structure of the population of Pepino mosaic virus infecting
RT tomato crops in Spain";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1270
FT /country="Spain:Navarra"
FT /db_xref="taxon:112229"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Pepino mosaic virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="1"
FT /clone="Na 04.1 TGB"
FT CDS 51. .755
FT /gene="TGBp1"
FT /product="triple gene block protein 1"
FT /protein_id="CAJ14370.1"
FT /translation="MERSTLINLLQLHHFEPKLSAEGIIVVHGIAGTGKTTLLRTLFSA
FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT LTIGELNARSNS"
FT CDS 736. .1107
FT /gene="TGBp2"
FT /product="triple gene block protein 2"
FT /protein_id="CAJ14371.1"
FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT SCYNTHSSTNNTQPLSGHH"
FT CDS 959. .1213
FT /gene="TGBp3"
FT /product="triple gene block protein 3"
FT /protein_id="CAJ14372.1"
FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIHQPTIHNHC
FT QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
XX
SQ Sequence 1270 BP; 390 A; 300 C; 207 G; 373 T; 0 other;
AM041992 Length: 1270 November 1, 2005 08:47 Type: N Check: 7705 ..
1 ccctccaaaa gcaacacatt gaggggttaa gttttcccca gattcgcgaa
51 atggaaagat caactctgat taatttactt caattgcacc acttcgagcc
101 aaaactcagt gctgaaggaa tcatagttgt gcacggaatt gcaggcactg
151 ggaaaaccac tttacttagg actttatttt ctgcttaccc tagcttagtt
201 ataggttcac ctaggccttg ctatctagat aaacaaaaca aaatttcaca
251 agtttgctta tcttgctttc ccaataccca ttgtgatatc gtcgatgagt
301 atcatttgct agaaagtttt ccagaaccaa aattggctat ctttggtgac
351 ccctgtcaat gcacatacat tgagagactt agagtcccac attacacttc
401 cttcagaact catagatttg gaaagtcaac tgctgagatt ttgaacaaac
451 tgtttgacct taatatagtc tcagttaaga aagaagacga catcgttgaa
501 ttctttaacc cttttgaagt tgaccccact gagcatatct ctgcttctga
551 agaagaagtc ttggactttg tttctgacca agtggtgacc actagctcag
601 aggaactagc aggacttgag tttgcagaaa caactttcta ctgcacaaca
651 ttggccgcag ctgttgctga aaatcctgct aagactttca tctctctgac
701 tagacacacc cacaaactca ccattgggga actaaatgcc aggtctaact
751 cctagagctg acctcactga cacatacaaa atcattgcca ttgctttctt
801 gttgtcagct tgcatttact tccaaaatag ccactaccaa cctgttgctg
851 gagacaactt gcaccgtttg ccttttggtg gccaatatca agacggcacc
901 aaaaagatat cttattttcc acaacagcag tcatactttc attctggaaa
951 caaattaaat gtcctcatac ttatcttcat tctcacattg ggtattgtcc
1001 tcaccaataa atttagtttt agctttagtc gtactactca ccagcattct
1051 tgctataaca cacattcatc aaccaacaat acacaaccat tgtcaggtca
1101 tcattgacgg tgctgcaata gtcataacaa attgtgagaa cacaccagaa
1151 gtgcttaaag caatcaactt ctccccttgg aacgggttaa gttttcctaa
1201 atttgaaaat taatattgag tgttcacaaa aatcaacttc aataaacaat
1251 catgcctgac acaacacctg