Sequence of DPV Sweet potato virus 2
Sweet potato virus Y partial gene for polyprotein, genomic RNA, isolate Pink2
ACC No: AM050888
Dated: 2006-07-17 | Length: 1380 | CRC: -1272748009
ID AM050888; SV 1; linear; genomic RNA; STD; VRL; 1380 BP.
XX
AC AM050888;
XX
DT 17-JUL-2006 (Rel. 88, Created)
DT 17-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE Sweet potato virus Y partial gene for polyprotein, genomic RNA, isolate
DE Pink2
XX
KW coat protein; polyprotein.
XX
OS Sweet potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus; unclassified Potyvirus.
XX
RN [1]
RP 1-1380
RA Tairo F.D.;
RT ;
RL Submitted (19-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL Tairo F.D., Plant Biology and Forestry Genetics, Swedish University of
RL Agric Sciences, P.O. Box 7080 SE-750 07, Uppsala, SWEDEN.
XX
RN [2]
RA Tairo F.D., Jones R.A.C., Valkonen J.P.T.;
RT "Molecular resolution of potyvirus complexes and phylogenetic analysis of
RT sweet potato virus Y infecting Sweetpotatoes in Western Australia";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1380
FT /organism="Sweet potato virus Y"
FT /isolate="Pink2"
FT /mol_type="genomic RNA"
FT /country="Australia:Perth"
FT /isolation_source="Ipomoea batatas"
FT /virion
FT /db_xref="taxon:225962"
FT CDS <1. .1167
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="CAJ19385.1"
FT /translation="RTCSSRQSSIYSRDSTESSVHMCEPSAEDLSEYVRVLNLMYDDAV
FT ESNDCEPVYHQSGTEETKDAGTPTPAKSVKTRTGRTQPLKAPEGSTSPTDPPPPTVEEI
FT IEEETPAQKALREARGKQPATQPSYTYGRDTGPRSPRQVTTTSRVRDRDVNAGTVGTFI
FT VPRLQITSSKKRLPIVDGRPVINLDHLAVYDPEQTNLANTRSTQEQFKAWYEGVKGDYG
FT VSDAEMSILLNGLMVWCIENGTSPNINGMWVMMDGEEQVTYPIKPLLDHAVPTFRQIMT
FT HFSDIAEAYIEKRNRIKAYMPRYGLQRNLTDMSLARYAFDFYELHSNTPVRAREAHMQM
FT KAAALKNAQNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
FT mat_peptide 169. .1164
FT /product="coat protein"
XX
SQ Sequence 1380 BP; 464 A; 273 C; 317 G; 326 T; 0 other;
am050888 Length: 1380 17-JUL-2006 Type: N Check: 2453 ..
1 cgaacttgct cgagtaggca gagctccata tatagcagag acagcactga
51 aagctctgta cacatgtgtg aaccatcagc tgaagatttg tccgagtatg
101 ttcgtgtttt gaacttgatg tatgatgatg ctgttgaatc gaatgactgt
151 gagccagtct accatcagtc aggcactgaa gaaacaaaag acgctggaac
201 cccaacacca gcaaaatcag ttaagacaag aacaggacga actcaaccgc
251 ttaaagcacc agaagggagc acgagtccaa cagatccacc acctccaaca
301 gttgaagaga taattgaaga agaaacacca gcacaaaaag cattgaggga
351 agcccgtggc aagcaaccag caacacaacc ctcatacact tatgggcgag
401 acacaggacc gcgtagccca aggcaagtta caacaacaag cagagttagg
451 gatagagatg ttaatgctgg aacagtaggg acgtttatag tcccaagact
501 tcaaattaca tcaagcaaga agagattgcc aatagttgac ggacgtccag
551 taatcaacct ggatcacttg gcagtttacg atccagagca aacaaatctt
601 gcaaatacca gatcaacaca agaacaattt aaggcatggt atgaaggtgt
651 gaagggtgat tatggggtat ctgatgctga aatgagcata ctccttaatg
701 gcctcatggt ttggtgtatt gagaatggta catcaccgaa tattaatgga
751 atgtgggtga tgatggacgg agaagaacaa gtaacttatc caataaaacc
801 tctattggat catgctgtcc ccacatttag acagataatg acacacttca
851 gcgacatagc tgaagcgtac attgaaaaga gaaacaggat aaaggcctat
901 atgccaagat atggcctaca gaggaatttg actgatatga gtcttgcgcg
951 gtatgcattc gatttctatg aactccactc aaacacacca gtaagagcaa
1001 gggaggcaca tatgcaaatg aaagcagcag ctttaaagaa tgcacagaat
1051 cgcctgtttg gtttggatgg aaacgtctcc acgcaagaag aagacacgga
1101 gaggcataca acgactgatg ttacaagaaa tatacataac ctgttaggaa
1151 tgagaggtgt gcagtaaaca atatattgct cgtactttta atttcagttg
1201 gtctttaatt taaattcgtg tctttcagtc ccgaagagtg ttggttgtat
1251 gtagtaacta tgtgtggttg taccaccgtt gctacatata agaaatcctc
1301 tttctattac gtatcataag ggactcttaa aagtgagtct ttgactcgta
1351 agaaaagcct ttttggttcg tgatcgagcc