Sequence of DPV Cymbidium mosaic virus
Cymbidium mosaic virus TGB3 gene and CP gene, genomic RNA, isolate SMi2
ACC No: AM055640
Dated: 2006-06-09 | Length: 6225 | CRC: 1444905172
ID AM055640 standard; genomic RNA; VRL; 6225 BP.
XX
AC AM055640;
XX
SV AM055640.2
XX
DT 02-AUG-2005 (Rel. 84, Created)
DT 09-JUN-2006 (Rel. 88, Last updated, Version 3)
XX
DE Cymbidium mosaic virus TGB3 gene and CP gene, genomic RNA, isolate SMi2
XX
KW coat protein; CP gene; TGB3 gene; triple-gene-block protein 3.
XX
OS Cymbidium mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RC revised by [3]
RA Li F.;
RT ;
RL Submitted (26-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL Li F., Department of Phytopathology, Yunnan Agricultural University, Key
RL Laboratory for Plant Pathology of Yunnan Province, Kunming, 650201, Yunnan
RL Province, CHINA.
XX
RN [2]
RA Li F., Wang Y., Chen H.;
RT "Cymbidium mosaic virus triple gene block 3 and coat protein gene";
RL Unpublished.
XX
RN [3]
RP 1-6225
RA Li F.;
RT ;
RL Submitted (13-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Li F., Department of Phytopathology, Yunnan Agricultural University, Key
RL Laboratory for Plant Pathology of Yunnan Province, Kunming, 650201, Yunnan
RL Province, CHINA.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6225
FT /organism="Cymbidium mosaic virus"
FT /isolate="SMi2"
FT /mol_type="genomic RNA"
FT /virion
FT /db_xref="taxon:12178"
FT CDS 5201. .5476
FT /gene="TGB3"
FT /product="triple-gene-block protein 3"
FT /db_xref="UniProtKB/TrEMBL:Q4A1J0"
FT /protein_id="CAJ20836.1"
FT /translation="MLGTRNILTTSGLPLPPPSSSLSAYIFPTILAIIFAVFALVAIHI
FT TTPEPFCTIHIDGASITITNCPDPAVILNKVAIGPWRGLSYHDNLK"
FT CDS 5479. .6150
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:Q6T803"
FT /db_xref="InterPro:IPR000052"
FT /db_xref="UniProtKB/TrEMBL:Q6T803"
FT /protein_id="CAJ20837.1"
FT /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT E"
XX
SQ Sequence 6225 BP; 1659 A; 1814 C; 1223 G; 1529 T; 0 other;
am055640 Length: 6225 09-JUN-2006 Type: N Check: 5608 ..
1 gaaaaccaaa cctcacgtct attccgctat ccgagcgaaa tagcagcccc
51 agcataggca atatcgcgct ccatggcccg agtacgtgat acccttgaca
101 ggctccgtga tccgtcggtc cttacctcaa ttaacgagga agcccaccga
151 catatccgtc ctgtccttac ctcggcactc gtaaactgcc cttacgcgtt
201 gatcgaggaa gaggccgact gtctcgaaaa tcttggcgtg acagtcaatc
251 ccttcgccat ccaaacgcat acacatgctg cagctaaaac tgttgaaaat
301 cgtatgttgg aaattgttgg cacccacctt cccaaagaac cctccacctt
351 catattcctc aagcggagca agctccgtta cttacgacgc gccgccaaca
401 acaaagacat atttcaaaac caacacattg agcctaaaga cttattgcgt
451 tacgatgacg agtcttgtga agcaatgcca gaatgctcca caagcacagc
501 ctacatcagc gatgctctcc atttcttgag ctacgctcag cttgggaaaa
551 tattccagga ttctcccaag ctgaaaattc tgctggcaac cctggtcctc
601 cccgtggaag ctctccacag gcacccatct ctttatcctg ccatctatac
651 tttgaactac cataaagatg gctttgaata tatacccggt aatcacgccg
701 gaggtgccta cttccacgag tactccactc tgcagtggtt gactctcggg
751 aaactaatta tcaacgatcc tttgaaagta aagaaacccc tcacacttac
801 tgtacagcta atagagagtc taggggctaa ccatctttta cttatcaccc
851 gaggggatct tcgcacacct aaactgcgga cattcgccaa agatacccat
901 gttctactac cacaaatatt ccatcctaag ggtatgaatg cgaacaaacc
951 attgtccaaa cgtagagcca tgcagttgtg gctctacgcc aaatctgtta
1001 aagaggtgag cgaacgggat ctttatgcta aggtgaggca attgatcccg
1051 acttctgagt tagacctttt tgaccctgtg gaggtgaccc acttggtcaa
1101 ttatttacta ttcatcagtc acctttcctc cgtatcttcg tatgacgaca
1151 tcttgtcgtc caatatattc caacatttca ccatcccaat caagaacaag
1201 atacgggaat tggtccagct attcaccgga gcggaccaat ttaatcaact
1251 gctcaaagct ctcgactggc aaacgttttc atactctatg ccagtagaga
1301 ccatccatac acgtgcggcc aattatcaag tcgctaaaac gcttcgcatg
1351 tgcagagacc taccatgcga tgaatatgat cgtgtaaagg atgtcctcag
1401 acagctccct gacggagtga cgttgtttga ggaaaacgac aagcaagatc
1451 cctcaagttc cgaagccggg gactctgagg atgacactga ctccgtcgac
1501 ttcaaccttc cccccattca tgacttgccc ccaaactttg atcctctaga
1551 caagggcaag tccattatcg ttgatactga cagcccctca actcctacgg
1601 catctgccgt cacttttgct gccggtatca actcctcagc ctccacaaat
1651 atttcatttg gaagcttcac acctgaggct ggggccaccc cccttcctcc
1701 catggaaaag ttaccatggg atctttggat tcccctactg gaacaacatg
1751 gcttcaaagg aaagagtaag ctgtacaagc ccacgggtga actaatctgc
1801 cccataactg aaatcaagac agttccccac tgcccctttc ccgacaaagt
1851 cccggatggc tgtgtgcttg cgcttaaatc tattaagcgt ttcgccacca
1901 aaatgaccat gctcagttct cgagcttccg cctacacttc tgacattaag
1951 aatagtagga ctgggaagct cctacccgcc atgaacatgc cctggaaagc
2001 ctctctcgcc tatgtcactc aacatggtga tagagaaatt cctggcgtcg
2051 tgatccatgg tgccggtggc tgtggcaaat cttatgccat ccaaaaatgg
2101 ttgagaagct gctctgatcc tggtgcagct actgtggtat gcccaaccct
2151 agaactacgt aatgactggc tcaataagat cggaagctac gaacaaacga
2201 atatcaaaac tttcgagaaa gctttaattc agccagtcaa caacgtagtt
2251 atctttgatg actacaccaa gctacccccc gggtacattg agaccatggt
2301 gtaccatcac cacaacctcg acctgatcat attaactggg gatcctatgc
2351 agagtgccta ccatgaaact aacagggatg cctacatctc tttaatacca
2401 gatgcctctg ccatttttag tgagtactgt gagttcaaca tcaacgccac
2451 ccaccgtaat gtggctgaac tcgcttgcct cctcggcgtc tattccgaac
2501 gccaaggcaa actcacggtc tccttcagcg cagccccact ttctaaaggt
2551 aaagtaccca ttctggtacc ctctagaatg aagcaagagg cttttgctga
2601 tgtcggcaac cgttgcatga cttatgctgg ctgccagggt ctcactgccc
2651 ctaaaatcca aattttgata gacaaccaca ctacgttctg ctctgaacaa
2701 acattataca cttgtctatc acgagctgtg gaccaaatcc acttcattaa
2751 cactggtccc aactcgcagg ctttctggac caaattggaa tcaacgccgt
2801 atctaaaagc tttcctcgat aattaccgtg aggaacaaac tgaacggcta
2851 acatctaccg ccccagagcc tgaagtccgt gagccagcag ccccaaaaac
2901 gcatatccct gtcgaaaata catctggctt acgcatttct gcacttgacc
2951 tgccggaaaa gcactctcgc gagattttca acaaggcgca tggcttttcc
3001 aacgctattc agggagaagg cgtagctccc atgttccagc atcaacaggc
3051 aaaggacgaa accctttaca aggctaccat agacgctaga ctctctataa
3101 cacatcctga tgaaaataaa agagagtttg ccatgaagaa agacactggg
3151 gacgtccttt tcatcaatta caaagctata atgaatctac ctcatgagcc
3201 tgttcctttt gaacctcgtc tctggaacat ctgcaaagct gaagtgcaga
3251 acacatatct agccaaaccc attgcaaatc ttatcaatgg taccttaagg
3301 caatcacctg attttccagc caataaaata gccttattcc tgaaatcgca
3351 atgggtaaag aaaatcgaga aaattggagc cataccagtt aaacctggac
3401 agactattgc atcatttatg caagagactg ttatgctgta tggcaccatg
3451 gcacgctacc tccgtaagat gcggcaaaga tatcaacccg cacatatatt
3501 tatcaactgt gaaaagactc cggaggactt caataaattc atacttgagc
3551 actggtcatg caagcaagtt gcccacacta acgattttac tgcttttgac
3601 cagtcacaag atgctgccat gctccaattt gaggttatca aagctagata
3651 cttcaatatc cccgaggaag ttatagaagg atacatccaa attaagctca
3701 ccgctgaaat cttcctcggg acactttcca tcatgcgcct atctggtgaa
3751 gggccgacct tcgacgccaa tactgaatgc tctattgcct acaacgccac
3801 cagattccat attaatgaag acgtcaccca agtatacgcc ggtgacgaca
3851 tggctatgga ccatgtgtgc cctgagaaga agagcttcaa agctttggaa
3901 aagaaactga aactaacctc aaaacctctc tatccaaagc aaaaacctgg
3951 agactgggcc gatttctgcg gctggactat aacgccttat ggcatcatta
4001 agaatcctaa gaaacttgat gcatgcctac aattgcacac acaactgaac
4051 gataccgata aagtcgctag gtcatacgca ctcgatgcta aatatgctta
4101 cgatctgggc gatcgcattc atgagattct gaatgccgat gaaatgacca
4151 gccacttcaa tgtcataaga cagttgcaca aactgcatca acaagatgtg
4201 ctggtcacgc ccgagactac cgtagccaca gcggtaaagt ctagacctga
4251 cgtggaggat ctgtggctcc gtgcgcttag cttccctgac tggacggacc
4301 gcgcccaact tttaaaacgg ggttaatttt gatggagcta gcgtacttag
4351 ttagattgct agagcacaat aaattcgagc gcaccaatct gcccctttcc
4401 tcacccttag ttgtacacgg aattgctggc agtggaaaat ccaccatcct
4451 cacaactttc catcaccatt acccggctca ccctatcttc tcacacagtc
4501 ccacattgct tgaccctagc aaccgcatat accaacagtg catcaccacc
4551 gactcggtgc cagacggtgc tatcgtagac gagtacaatt acaaagcact
4601 cgactactct cgctgtctag ccctcttcgg tgatccactc cagcttccac
4651 attcacttca acctcactac tactctagtc gcacccaccg ctacggtccc
4701 aagctcacta gcctactcaa cgacctcttc cacctttcta tcacttctct
4751 tgcccccatc gacagccttg attacgctga tccttttgct gttgacccct
4801 ctggatttac cattgctgac gaggaagtgt acaactttgt ctctcagcag
4851 gttcccggca ctttgttgcc gcttgatact gtaggtttag aatattctag
4901 tgttagcttt tactgcagtg atctccgaag ctgtgttgta ctaaggccac
4951 ttagcacctt catcgctctc acccgcgcca agggcaacct caccaccttc
5001 gatttcaatg ccaggtttag ttccaccacc tgaccactcc aagtcactct
5051 ttgtccttgc tattggtata actgtggtct ccgcattatt tgtgctaaag
5101 tcccacactt ttccaattgc aggcgacaat atccaccgat tcccttccgg
5151 cggccaatat aaagacggta ctaagcagat aaactactgt ccacctactc
5201 atgctaggta cccgaaatat cctgactaca agtggcttgc cgctaccgcc
5251 gccatcgtca tccctctctg cctatatatt tcctaccatc ctggcaataa
5301 tattcgccgt atttgccctt gttgcaatac atatcaccac ccctgagcct
5351 ttctgtacca tacacataga cggggcatct attactatca ctaactgccc
5401 cgatcctgca gttatattaa ataaagtagc cataggcccc tggcgagggt
5451 taagttacca cgataatttg aaataatcat gggagagccc actccaactc
5501 cagctgccac ttactccgct gccgacccca cttctgcacc caagttggcc
5551 gacctggctg ccattaagta ctcacctgtc acctcctcta tcgccacccc
5601 cgaagaaatc aaggccataa cccaattgtg ggttaacaac cttggcctcc
5651 ccgctgacac cgtaggtacc gcggccattg acctggcccg cgcctacgct
5701 gacgtcggag cgtccaagag tgctaccctg ctcggtttct gccctacgaa
5751 acctgatgtc cgtcgcgccg ctcttgccgc gcagatcttc gtggccaacg
5801 tcaccccccg ccagttttgc gcttactacg caaaagtggt gtggaatctg
5851 atgctggcca ctaacgatcc gcccgccaac tgggccaaag ctggtttcca
5901 ggaggatacc cggtttgccg cctttgactt cttcgatgcc gtcgattcca
5951 ctgccgcgct ggagcctgct gaatggcagc gccgccccac tgaccgtgaa
6001 cgtgctgcgc actcgatcgg gaagtacggc gcccttgccc gtcagcgtat
6051 ccaaaacggc aacctcatca ccaacattgc cgaggtcacc aagggccatc
6101 ttggctccac caacaccctc tatgctctgc ctgcaccccc tactgaataa
6151 cgccaaactt aataaggcgt gtggttttct aaagtttgtt tccactactg
6201 gcataatatg tttagccaga taaac