Sequence of DPV Pepino mosaic virus

Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and CP gene for coat protein, genomic RNA, clone Mu 00.4, isolate 2

ACC No: AM113791

Dated: 2005-12-13 | Length: 786 | CRC: -1284004016

                
ID   AM113791   standard; genomic RNA; VRL; 786 BP.
XX
AC   AM113791;
XX
SV   AM113791.1
XX
DT   13-DEC-2005 (Rel. 86, Created)
DT   13-DEC-2005 (Rel. 86, Last updated, Version 1)
XX
DE   Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and
DE   CP gene for coat protein, genomic RNA, clone Mu 00.4, isolate 2
XX
KW   coat protein; CP gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-786
RA   Pagan I.;
RT   ;
RL   Submitted (13-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL   Madrid, 28040, SPAIN.
XX
RN   [2]
RA   Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA   Jorda C., Garcia-Arenal F.;
RT   "Genetic structure of the population of Pepino mosaic virus infecting
RT   tomato crops in Spain";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .786
FT                   /country="Spain:Murica"
FT                   /db_xref="taxon:112229"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Pepino mosaic virus"
FT                   /clone="Mu 00.4"
FT                   /isolate="2"
FT                   /isolation_source="Tomato"
FT   CDS             <1. .35
FT                   /codon_start=3
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAJ34688.1"
FT                   /translation="NGLSFPKFEN"
FT   CDS             73. .786
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAJ34689.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 786 BP; 221 A; 213 C; 161 G; 191 T; 0 other;

am113791 Length: 786  13-DEC-2005  Type: N  Check: 9515  ..

       1  ggaacgggtt aagttttcct aaatttgaaa attaatattg agtgttcaca
      51  aaatcaactt caatgaacaa tcatgcctga cacaacacct gttgctgcca
     101  cttcaagtgc accacccaca gccaaagatg ctggtgccaa agctccttct
     151  gacttctcaa atcccaatac agctcctagt ctcagtgatt tgaagaaagt
     201  caagtatgtc tccaccgtga cctccgtggc cacaccagct gaaattgaag
     251  ccctaggcaa aatcttcacc gctatgggcc ttgccgccaa tgagactggt
     301  ccggccatgt gggatctagc tcgtgcatat gctgatgtgc agagttctaa
     351  atcggcacag ctgattggag ctaccccttc caaccctgca ctatcacgcc
     401  gagcccttgc tgctcagttt gatcgaatca atataacccc caggcaattt
     451  tgcatgtact ttgccaaagt tgtttggaac atacttctcg acagcaacat
     501  tccaccagca aattgggcca aacttggtta ccaagaagat acaaaatttg
     551  ctgcatttga cttctttgat ggagtcacca accctgccag cctgcagcct
     601  gctgatggtc ttatcaggca gccaaatgag aaagaactag ctgctcactc
     651  cgtagctaag tacggcgcct tggctaggca aaagatctcc acaggtaatt
     701  atattaccac acttggagaa gtcacacgtg gacacatggg aggagctaac
     751  accatgtacg cgatagacgc accccctgaa ctttaa