Sequence of DPV Pepino mosaic virus

Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and CP gene for coat protein, genomic RNA, clone Mu 04.2, isolate 2

ACC No: AM113832

Dated: 2005-12-13 | Length: 803 | CRC: -75087398

                
ID   AM113832   standard; genomic RNA; VRL; 803 BP.
XX
AC   AM113832;
XX
SV   AM113832.1
XX
DT   13-DEC-2005 (Rel. 86, Created)
DT   13-DEC-2005 (Rel. 86, Last updated, Version 1)
XX
DE   Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and
DE   CP gene for coat protein, genomic RNA, clone Mu 04.2, isolate 2
XX
KW   coat protein; CP gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-803
RA   Pagan I.;
RT   ;
RL   Submitted (13-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL   Madrid, 28040, SPAIN.
XX
RN   [2]
RA   Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA   Jorda C., Garcia-Arenal F.;
RT   "Genetic structure of the population of Pepino mosaic virus infecting
RT   tomato crops in Spain";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .803
FT                   /country="Spain:Murcia"
FT                   /db_xref="taxon:112229"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Pepino mosaic virus"
FT                   /clone="Mu 04.2"
FT                   /isolate="2"
FT                   /isolation_source="Tomato"
FT   CDS             <1. .57
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAJ34770.1"
FT                   /translation="HNFSPWNGVSFPKFENQY"
FT   CDS             90. .803
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAJ34771.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 803 BP; 226 A; 222 C; 161 G; 194 T; 0 other;

am113832 Length: 803  13-DEC-2005  Type: N  Check: 4393  ..

       1  cacaacttct ccccttggaa cggggtaagt tttcctaaat ttgaaaatca
      51  atattgagtg ttcacaaaaa tcaactttaa taaacaatca tgcctgacac
     101  aacacctgtt gctgccactt caagtgcacc acccacagcc aaagatgctg
     151  gtgccaaagc tccttctgac ttctcaaatc ccaatacagc tcctagtctc
     201  agtgatttga agaaagtcaa gtatgtctcc accgtgacct ccgtggccac
     251  accagctgaa attgaagccc taggcaaaat cttcaccgct atgggccttg
     301  ccgccaatga gactggtccg gccatgtggg atctagctcg tgcatatgct
     351  gatgtgcaga gttctaaatc ggcacagctg attggagcta ccccttccaa
     401  ccctgcacta tcacgccgag cccttgctgc tcagtttgat cgaatcaata
     451  taacccccag gcaattttgc atgtactttg ccaaagttgt ttggaacata
     501  cttctcgaca gcaacattcc accagcaaat tgggccaaac ttggttacca
     551  agaagataca aaatttgctg catttgactt cttcgatgga gtcaccaacc
     601  ctgccagcct gcagcctgct gatggtctta tcaggcagcc aaatgagaaa
     651  gaactagctg ctcactccgt agctaagtac ggcgccttgg ctaggcaaaa
     701  gatctccaca ggtaattata ttaccacact tggagaagtc acacgtggac
     751  acatgggagg agctaacacc atgtacgcga tagacgcacc ccctgaactt
     801  taa