Sequence of DPV Tomato yellow leaf curl China virus
Tomato yellow leaf curl China virus-[Y322], complete genome, isolate Y322
ACC No: AM181683
Dated: 2007-05-01 | Length: 2730 | CRC: -1852836595
ID AM181683; SV 1; circular; genomic DNA; STD; VRL; 2730 BP.
XX
AC AM181683;
XX
DT 23-JAN-2006 (Rel. 86, Created)
DT 01-MAY-2007 (Rel. 91, Last updated, Version 2)
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DE Tomato yellow leaf curl China virus-[Y322], complete genome, isolate Y322
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KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein;
KW complete genome; pre-coat protein; replication enhancer protein;
KW replication-associated protein; transcription enhancer protein.
XX
OS Tomato yellow leaf curl China virus-[Y322]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2730
RA Zhou X.;
RT ;
RL Submitted (13-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268, Kaixuan
RL Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN [2]
RA Liao B., Liu Y., Xie Y., Zhou X.;
RT "Genomic characterization of DNA-A and its associated satellite DNA
RT molecule from an isolate of Tomato yellow leaf curl China virusinfecting
RT Solanum aculeatissimum Jacq";
RL Zhi Wu Bing Li Xue Bao 37(2):138-143(2007).
XX
CC Related entry AM181684
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FH Key Location/Qualifiers
FH
FT source 1. .2730
FT /organism="Tomato yellow leaf curl China virus-[Y322]"
FT /segment="DNA A"
FT /specific_host="Solanum aculeatissimum"
FT /isolate="Y322"
FT /mol_type="genomic DNA"
FT /country="China"
FT /virion
FT /db_xref="taxon:366681"
FT CDS 129. .476
FT /gene="AV2"
FT /product="pre-coat protein"
FT /db_xref="GOA:Q2MCW7"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:Q2MCW7"
FT /experiment="experimental evidence, no additional details
FT recorded"
FT /protein_id="CAJ57708.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL
FT ISVIRARDYGEASRRYSHFHSRLEGASPAELRQPLYGSCCCPHCPRHQKTNVVKQAHVS
FT EAHDVPDVQKP"
FT CDS 289. .1059
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:Q2MCW6"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q2MCW6"
FT /experiment="experimental evidence, no additional details
FT recorded"
FT /protein_id="CAJ57709.1"
FT /translation="MAKRPADIVISTPASKVRRRLNFDSPYTGRAVAPTVRVTRRQMWS
FT NRPMYRKPMMYRMYRSPDVPRGCEGPCKVQSYEARHDVSHTGKVICVSDVTRGNGITHR
FT VGKRFCIKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP
FT STATVKNDLRDRFQVRRKFYSTVTGGQYACKEQALVKRFIRVNTHVVYNHQEQAKYENH
FT TENALLLYMVSTHASNPVYATLKVRIYFYDSQMN"
FT CDS complement(1056. .1460)
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:Q2MCW5"
FT /protein_id="CAJ57710.1"
FT /translation="MDSRTGELLTATQSENGVYIWTVKNPLYFKITKHHERPFLRTTDI
FT ITLQVQFNYNLRKALGIHKCFLTCQIWTHLHPQTSHFLRVFKYQFLKYLDRLGVISINN
FT CIRAFRYVLYDVLNGTIDVIENHDIKFNIY"
FT CDS complement(1201. .1605)
FT /gene="AC2"
FT /product="transcription enhancer protein"
FT /db_xref="GOA:Q2MCW4"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:Q2MCW4"
FT /protein_id="CAJ57711.1"
FT /translation="MRSSSPSTGHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFVALG
FT CHNHGFTHRGTTHCNSIREWRVYLDGQKSPIFQDNQTPRETISEDHRHHHITSPIQLQP
FT EESVGDTQMFSNLPNLDSFTSSDLAFLKSI"
FT CDS complement(1508. .2593)
FT /gene="AC1"
FT /product="replication-associated protein"
FT /db_xref="GOA:Q2MCW3"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q2MCW3"
FT /protein_id="CAJ57712.1"
FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQTLETPVNKLFIR
FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPHRSAHFHPNIQGAKSSTDVKSYM
FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH
FT NLNSNLDRIFTPPMEEYISPFSSSSFDQVPEELDEWAVDNVVSAAARPLRPVSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAVKNAIFVTLNGPL
FT YSGSYQGATPNRQEDNQTTTS"
FT CDS complement(2143. .2436)
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:Q2MCW2"
FT /protein_id="CAJ57713.1"
FT /translation="MGLLTCMFSSNSKESSNVKIKDSSISHPHTGQHISIRTFRELKAQ
FT QMSNPTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY"
XX
SQ Sequence 2730 BP; 726 A; 538 C; 611 G; 855 T; 0 other;
am181683 Length: 2730 01-MAY-2007 Type: N Check: 8516 ..
1 accggtgggc cgcgcgattt ttttaaagtg gtccccatgt gcgcgttcgt
51 ccaataatat gcgctcctca aagcttagtt atgaaatggt cccctataaa
101 acttagtccc cacgtattta tgttaaagat gtgggatcca ttgcttaatg
151 agttccctga aaccgtgcac ggttttaggt gtatgttagc aattaagtat
201 ttgcagttag tcgaaaatac atactctccc gatacattag gttacgattt
251 aatccgtgat ttaatttcag ttatccgtgc tagagactat ggcgaagcgt
301 cccgccgata tagtcatttc cactcccgcc tcgaaggtgc gtcgccggct
351 gaacttcgac agcccctata cgggtcgtgc tgttgccccc actgtccgcg
401 tcaccagaag acaaatgtgg tcaaacaggc ccatgtatcg gaagcccatg
451 atgtaccgga tgtacagaag ccctgatgtt ccaagggggt gtgaaggacc
501 atgcaaagtc caatcttatg aggcccgtca tgatgtgtcg catactggta
551 aggttatttg tgtatcggat gttactcgtg gtaatggaat tactcaccgt
601 gttggtaaga ggttctgtat taaatccatt tacgtcattg ggaagatatg
651 gatggacgag aatattaaag tgaagaatca cacgaatact gtaatgtttt
701 tccttgttag agatcgacgt cctagtggta cacctatgga ttttcaacaa
751 gtgtttaatt gttatgacaa tgaacccagc actgctactg taaaaaacga
801 tttaagggat cgttttcaag ttcgtcgtaa attctattct acggttacgg
851 gcggacagta tgcgtgtaag gagcaggctt tggtgaagag attcattcgt
901 gttaacactc atgttgttta caaccatcaa gaacaggcga agtacgagaa
951 tcatactgag aatgcattat tgttgtatat ggtgtctact catgcgagta
1001 atcctgtata tgcgactttg aaagtccgca tctatttcta tgattcacaa
1051 atgaattaat aaatattgaa ttttatatca tgattttcaa ttacatctat
1101 tgttccattc aatacatcgt ataatacata tctaaaagcc ctaatacaat
1151 tgttaatgct aatcacgcct aatctatcta aatatttaag aaattggtat
1201 ttaaatactc ttaagaaatg cgaggtctga ggatgtaaat gagtccagat
1251 ttggcaggtt agaaaacatt tgtgtatccc caacgctttc ctcaggttgt
1301 agttgaattg gacttgtaat gtgatgatgt cggtggtcct cagaaatggt
1351 ctctcgtggt gtttggttat cttgaaatat aggggatttt tgaccgtcca
1401 gatatacacg ccattctctg attgagttgc agtgagtagt tccccggtgc
1451 gtgaatccat gattgtgaca gcctaaagca acgaagtatg aacacccaca
1501 aggtagatca actcgtcgtc gtctggttgt cttcttggcg attcggtgtt
1551 gcaccttgat aggaacctga gtagagtggc ccgttgaggg tgacgaagat
1601 cgcattcttt actgcccagt ttcgaagtgc ggaattcttt tcctcttcta
1651 gatactcttt atagctggaa ttgggtcctg gattgcagag gaagatagtg
1701 gggatcccgc ctttaatttg aactggtttt ccgtatttgg tgttgctttg
1751 ccagtccctt tgggccccca tgaattcttt aaagtgcttt aagtagtgcg
1801 gatctacgtc atcaatgacg ttgaaccaag catcattact gtataccttt
1851 gggcttagat ctaaatgacc gcacaaataa ttatgtggtc ctaatgacct
1901 ggcccacatc gtcttccccg ttctactatc accctctatg actatactta
1951 ccggtcttaa aggccgcgca gcggcactca caacattatc gaccgcccat
2001 tcatcaagtt cttcgggaac ttggtcaaaa gaagaggaag aaaaaggaga
2051 aatatattcc tccattggag gagtaaaaat cctatctaaa ttactattta
2101 aattatgaaa ttgtaaaaca aaatctttag gagccttctc ccttagtata
2151 ttgagggccg aagctttgga ccctgaattg attgcctcgg catatgcgtc
2201 gttggcagat tggcaacctc ctctagccga tcttccatcg atctggaaaa
2251 ctccatgatc aagcacgtct ccgtcttttt ccatgtagga tttgacatct
2301 gttgagcttt tagctccctg aatgttcgga tggaaatgtg ctgacctgtg
2351 tggggatgtg agatcgaaga atctttgatt tttacattgg aactttcctt
2401 cgaattggat gagaacatgc aggtgaggag tcccatcttc gtgtagttct
2451 ctacagattc tgatgaatag tttatttact ggggtttcta gggtttgaat
2501 ttgggaaagt gcctcttctt tagtgagaga gcagtgtgga tatgttagga
2551 aataattctt ggcatttatt ctgaatttat ttgggggagc cattgactgg
2601 tcaatcggtg tctctcaaac ttggctatgc aaatggtgtc tggggtctta
2651 tttatatgtg gacaccaaat ggcattatcg taatacccaa aagaaattca
2701 aaattcaaaa gcggccatcc gtataatatt