Sequence of DPV Siegesbeckia yellow vein virus

Siegesbeckia yellow vein virus-[GD21] AV2 gene for precoat protein and partial AV1 gene for coat protein, isolate GD21

ACC No: AM230639

Dated: 2007-03-24 | Length: 504 | CRC: 1442614805

                
ID   AM230639; SV 1; linear; genomic DNA; STD; VRL; 504 BP.
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AC   AM230639;
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DT   30-JUN-2006 (Rel. 88, Created)
DT   24-MAR-2007 (Rel. 91, Last updated, Version 2)
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DE   Siegesbeckia yellow vein virus-[GD21] AV2 gene for precoat protein and
DE   partial AV1 gene for coat protein, isolate GD21
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KW   AV1 gene; AV2 gene; coat protein; precoat protein.
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OS   Siegesbeckia yellow vein virus-[GD21]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-504
RA   Zhou X.P.;
RT   ;
RL   Submitted (24-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL   Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268,
RL   Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA.
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RN   [2]
RA   Wu J.B., Zhou X.P.;
RT   "Siegesbeckia yellow vein virus is a distinct begomovirus associated with a
RT   satellite DNA molecule";
RL   Arch. Virol. 152(4):791-796(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .504
FT                   /organism="Siegesbeckia yellow vein virus-[GD21]"
FT                   /specific_host="Sigesbeckia glabrescens"
FT                   /isolate="GD21"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Guangdong province"
FT                   /virion
FT                   /db_xref="taxon:371407"
FT   CDS             112. .468
FT                   /transl_table=1
FT                   /gene="AV2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:Q14RU4"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q14RU4"
FT                   /protein_id="CAJ76454.1"
FT                   /translation="MKMWDPLINEFPETVHGFRCMLAIKYLQAVQLTYSPDTVGYDLIR
FT                   ELIRILRTKDYGQATCRYSHFHSRLQGTSEVELRQPLSQQCCCPNCPCHQQKEDMGQSA
FT                   HVQKAQNVQDVQKP"
FT   CDS             278. .>504
FT                   /transl_table=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q14RU3"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:Q14RU3"
FT                   /protein_id="CAJ76455.1"
FT                   /translation="MAKRPADIVISTPASKVRRRLNFDSPYRSSAAAPTVLVTNKRRTW
FT                   VNRPMYRKPRMYRMYKSPDVPRGCEGPCKV"
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SQ   Sequence 504 BP; 146 A; 115 C; 102 G; 141 T; 0 other;

am230639 Length: 504  24-MAR-2007  Type: N  Check: 8497  ..

       1  taatattacc ggtggccccc aaaaaaatga tctagaccgt tgctcaaagc
      51  taactaaaaa atatccacgt atgcttttgt atatttaaat gtatttcctt
     101  ttgatttata tatgaaaatg tgggatcctt taattaacga attccctgag
     151  accgttcacg gttttagatg tatgcttgca ataaaatatc tgcaagccgt
     201  tcaattgacg tactcccctg atacggtagg atacgattta attcgtgaac
     251  ttatacgtat tttacgtact aaggattatg gccaagcgac ctgcagatat
     301  agtcatttcc actcccgcct ccaaggtacg tcggaggttg aacttcgaca
     351  gcccctatcg cagcagtgct gctgccccaa ctgtccttgt caccaacaaa
     401  aggaggacat gggtcaatcg gcccatgtac agaaagccca gaatgtacag
     451  gatgtacaaa agccctgatg ttcctcgtgg ttgtgaaggg ccatgcaaag
     501  tcca