Sequence of DPV Malvastrum leaf curl Guangdong virus
Malvastrum leaf curl Guangdong virus complete genome, isolate GD6
ACC No: AM236779
Dated: 2008-03-26 | Length: 2767 | CRC: 1337788583
ID AM236779; SV 1; circular; genomic DNA; STD; VRL; 2767 BP.
XX
AC AM236779;
XX
DT 30-AUG-2006 (Rel. 89, Created)
DT 26-MAR-2008 (Rel. 95, Last updated, Version 3)
XX
DE Malvastrum leaf curl Guangdong virus complete genome, isolate GD6
XX
KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein;
KW AC4 gene; AC4 protein; AV1 gene; AV2 gene; AV2 protein; coat protein;
KW complete genome.
XX
OS Malvastrum leaf curl Guangdong virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2767
RA Zhou X.P.;
RT ;
RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268,
RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN [2]
RX DOI; 10.1111/j.1365-3059.2007.01682.x.
RA Wu J.B., Mugiira R.B., Zhou X.;
RT "Malvastrum leaf curl Guangdong virus is a distinct monopartite
RT begomovirus";
RL Plant Pathol. 56(5):771-776(2007).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2767
FT /organism="Malvastrum leaf curl Guangdong virus"
FT /specific_host="Malvastrum coromandelianum"
FT /isolate="GD6"
FT /mol_type="genomic DNA"
FT /country="China:Guangdong province"
FT /lat_lon="23.68 N 116.63 E"
FT /virion
FT /PCR_primers="fwd_name: GD6 Full/F, fwd_seq:
FT gccgtctcaacttcgacagccc, rev_name: GD6 Full/R, rev_seq:
FT gacggcgtcgtaccttcgaagc"
FT /db_xref="taxon:377610"
FT CDS 119. .469
FT /transl_table=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:Q0KFZ7"
FT /protein_id="CAJ85988.1"
FT /translation="MWDPLVNEFPDTVHGFRCMLAVKYLQLVESTYSPDTLGYDLIRDL
FT ISVLRARNYVEATSRYCHFHTRFEGTTPSQLRQPLQQPCCCPHCPRHKQKENMGQPAHV
FT QEAQNVQNVSKP"
FT CDS 279. .1052
FT /transl_table=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:Q0KFZ6"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q0KFZ6"
FT /protein_id="CAJ85989.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYNNRAAAPTVLVTNKRRTW
FT VNRPMYRKPRMYRMYQSPNVPRGCEGPCKVQSYEQRHDIAHVGKVLCVSDVTRGNGLTH
FT RTGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTPQDFGQVFNMYDNE
FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMRINNHVTYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSIQN"
FT CDS complement(1049. .1453)
FT /transl_table=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:Q0KFY9"
FT /protein_id="CAJ85990.1"
FT /translation="MDSRTGEPITAAQAENGAYIWTVPNPLYFKIMHHHSRPFNTNHDI
FT IHVQIRFNHNLRKALGIHQCFLNFQIWTHLHPQTSRFLRVFSSQCIKYLEKLGIVTINN
FT VIRAVTHVLNNVLIGTIDVQETNILKFNLY"
FT CDS complement(1194. .1601)
FT /transl_table=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /db_xref="GOA:Q0KFY8"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:Q0KFY8"
FT /protein_id="CAJ85991.1"
FT /translation="MQNSSPSRGHSTLVPIKVQHRIAKKKSIRRRRIDLNCGCSYYISI
FT NCHNDGFTHRGTHHCSSSREWRVYLDGTKSPIFQDNASPQQTLQHEPRHNTCTNPIQSQ
FT PEESIGDTSVFSELPDLDSFTSSDIAFLKSL"
FT CDS complement(1501. .2589)
FT /transl_table=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /db_xref="GOA:Q0KFZ3"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q0KFZ3"
FT /protein_id="CAJ85992.1"
FT /translation="MPQPSRFKINAKNYFLTYPDCSLAKEETLEKIKALDTPTNKKYIK
FT ICRELHQNGNPHLHVLIQFEGKYQCKNQRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI
FT NKDGDTLEWGEFQIDGRSARGGQQSANDAYAQALNTGSKSEALNVIRELAPKDFVLQFH
FT NLNANLDRIFAPPLEVFISPFSSSSFDQVPKELEEWTAENVVSAAARPWRPKSIVIEGE
FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEDRNAALKAWTLKNAEFFTLTGPL
FT YSGTNQSPTPHSEEEINSQEEN"
FT CDS complement(2142. .2432)
FT /transl_table=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:Q0KFZ2"
FT /protein_id="CAJ85993.1"
FT /translation="MGTLISTCLSSSRENTSARISDSSTWYPQPGQHISIQTFRELNQV
FT PTSSPTSTRTETPSNGESFRSMEDLQEGGNNQPMTLTPRHLTLEVSRRLLM"
XX
SQ Sequence 2767 BP; 714 A; 561 C; 619 G; 873 T; 0 other;
am236779 Length: 2767 26-MAR-2008 Type: N Check: 4645 ..
1 accggatggc cgcgaaaaat tttagtggtg ggccctcgac gaataaaatc
51 gcacgttcat cgcttagtta tcgcgcgtac ccctatttaa aacttggtcc
101 gtaagttttg cttcaaaaat gtgggatcca cttgtgaacg agttccctga
151 taccgttcat ggttttaggt gtatgctcgc tgtaaaatac ttgcagttgg
201 tagaatctac gtattcacct gatacactcg gctacgatct tatccgagat
251 ttaatatctg tcttacgtgc aaggaattat gtcgaagcga ccagcagata
301 ttgtcatttc cacacccgct tcgaaggtac gacgccgtct caacttcgac
351 agcccttaca acaaccgtgc tgctgccccc actgtcctcg tcacaaacaa
401 aaggagaaca tgggtcaacc ggcccatgta caggaagccc agaatgtaca
451 gaatgtatca aagccctaat gtccctcgtg gatgtgaagg cccatgtaaa
501 gtccagtctt atgaacagcg tcatgatata gcccatgtag gtaaggtcct
551 ttgtgtttcc gatgtcaccc gtggtaatgg gcttacccat aggactggta
601 agaggttttg tgttaagtcc gtttatgttt tgggtaagat ctggatggat
651 gaaaacatca agactaaaaa tcacactaat accgtcatgt tctatttagt
701 ccgggataga agaccgtttg gtactcccca agattttggt caggttttta
751 acatgtatga taacgagcct agtaccgcta ctgttaagaa tgacaacaga
801 gataggtttc aagttcttcg ccgttttcaa gctacggtga caggtggtca
851 atatgcatgc aaggagcagg ctctagttag gaagttcatg aggattaaca
901 accatgtcac ttacaatcat caggaagctg ctaagtatga taaccatact
951 gagaatgctt tgttgttgta tatggcatgt actcatgcct ctaatccagt
1001 gtatgcgact ctgaaaattc ggatctattt ctatgattcg atacaaaatt
1051 aataaagatt gaattttaat atatttgttt cctgtacatc aattgttccg
1101 attaatacat tgtttaatac atgagtaaca gctcgaatta cattatttat
1151 tgttacaata cccaacttct ctaaatactt aatacattga ctactaaaga
1201 ctcttaagaa acgcgatgtc tgaggatgta aatgagtcca gatctggaag
1251 ttcagaaaac actgatgtat ccccaatgct ttcctcaggt tgtgattgaa
1301 tcggatttgt acatgtatta tgtcgtggtt cgtgttgaag ggtctgctgt
1351 ggtgatgcat tatcttgaaa tataggggat ttggtaccgt ccagatatac
1401 gcgccattct cggcttgagc tgcagtgatg ggttcccctg tgcgtgaatc
1451 catcgttgtg gcagttgatg gatatgtaat agctgcagcc gcagttgaga
1501 tcaattctcc tcctgcgaat tgatttcttc ttcgctatgc ggtgttggac
1551 tttgattggt accagagtag agtggccccg tgagggtgaa gaattctgca
1601 ttctttagag tccacgcctt taatgcagca ttcctatcct cgtccagata
1651 ttctttatag ctggagttgg gaccaggatt gcagaggaag atagtgggaa
1701 ttcctccttt aatttgaatt ggtttcccgt actttgtgtt gctttgccag
1751 tccctttggg ctcccatgaa ctctttaaaa tgctttaggt agtggggatc
1801 gacgtcatcg atgacgttgt accaagcatc attactgtag acctttggac
1851 ttagatccaa gtgtccacat aaatagttgt gtgggcctaa acatctggcc
1901 cacattgtct tccctgttct actctctccc tctatcacaa tactctttgg
1951 ccgccatggc cgcgcagcgg cactaactac attctcagca gtccactctt
2001 caagttcttt tggaacttga tcgaatgaag aagaagaaaa aggagaaata
2051 aatacctcca atggaggtgc aaaaattcta tctaaattgg catttaaatt
2101 atgaaattgt aaaacaaaat ctttaggagc taactcccta atcacattaa
2151 gagcctccga cttacttcca gtgttaagtg cctgggcgta agcgtcattg
2201 gctgattgtt gcccccctct tgcagatctt ccatcgatct gaaactctcc
2251 ccattcgagg gtgtctccgt ccttgttgat gtaggacttg acgtcggaac
2301 ttgatttagc tccctgaatg tttggatgga aatgtgttga cctggttggg
2351 gataccaagt cgaagaatcg ctgattcttg cactggtatt ttccctcgaa
2401 ctggataagc acgtggagat gagggttccc attttggtgt agttctcgac
2451 agattttgat gtattttttg tttgttggtg tatctagggc ttttattttt
2501 tcaagggttt cttctttggc gagagagcag tctggataag taaggaaata
2551 atttttggca tttatcttaa aacgacttgg ttgaggcatt ttgatagtcg
2601 ttttggtatc ggggtctctc aactcttgta ttgaatcggt gtactggagt
2651 ctcaattgac ttggtcaatg ggtacctaat gagaggatat gctctgggta
2701 tcttggtacc cttatatact tggactcaat ggcaggtatg aaagataatt
2751 aatctccgtt taatatt