Sequence of DPV Potato virus Y

Potato virus Y partial gene for polyprotein, coat protein region, genomic RNA, isolate Henan43

ACC No: AM236812

Dated: 2008-03-18 | Length: 1132 | CRC: -990909397

                
ID   AM236812; SV 1; linear; genomic RNA; STD; VRL; 1132 BP.
XX
AC   AM236812;
XX
DT   18-MAR-2008 (Rel. 95, Created)
DT   18-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, coat protein region, genomic
DE   RNA, isolate Henan43
XX
KW   coat protein; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1132
RA   Li X.;
RT   ;
RL   Submitted (18-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL   Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN   [2]
RA   Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT   "Sequences comparisons of Potato virus Y isolates infecting Chinese
RT   tobacco.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1132
FT                   /organism="Potato virus Y"
FT                   /specific_host="Nicotiana tabacum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Henan43"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Henan"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAJ87139.1"
FT                   /translation="GNDTIDAGGSNKKDAKPEQGSIQSNPNKGKDRDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMEHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     <1. .801
FT                   /product="coat protein"
FT   3'UTR           805. .1132
XX
SQ   Sequence 1132 BP; 348 A; 208 C; 282 G; 294 T; 0 other;

am236812 Length: 1132  18-MAR-2008  Type: N  Check: 1894  ..

       1  ggaaatgaca caattgatgc aggagggagc aacaagaaag atgcaaaacc
      51  ggagcaaggc agcatccagt caaacccgaa caaaggaaaa gatagagatg
     101  tgaatgctgg cacatctggg acacatactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc caagagcaag ggagcaaccg tgctaaattt
     201  agaacacttg cttgagtacg ctccacaaca aattgatatt tcaaatactc
     251  gggcaactca atcacagttt gatacgtggt atgaggcagt gcggatggca
     301  tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg ggatgaacaa gttgagtacc cgttgaaacc aatcgttgaa
     451  aatgcaaaac caacccttag gcaaatcatg gaacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatgtgg gtttagcgcg ttatgccttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaagccgcag cgttgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  gtgatgtagt gtctctccgg acgatatata agtatttaca tatgcagtaa
     851  gtattttggc ttttcctgta ctacttttat cataattaat aatcagtttg
     901  aatattacta atagatagag gtggcagggt gatttcgtca ttgtggtgac
     951  tctatctttt aattccgcat tattaagtct tagataagag tgccgggttg
    1001  tcgttgttgt agatgattca tcgattgggt gatgttgcga ttctgtcgta
    1051  gcagtgacta tgtctggatc tatctgcttg ggtgatgttg tgatttcgtc
    1101  ataacagtga ctgtaaactt caatcaggag ac