Sequence of DPV Potato virus Y
Potato virus Y partial gene for polyprotein, P1 and helper component-proteinase, HC-Pro region, genomic RNA, isolate Gansu15
ACC No: AM236840
Dated: 2008-03-19 | Length: 1461 | CRC: 794840746
ID AM236840; SV 1; linear; genomic RNA; STD; VRL; 1461 BP.
XX
AC AM236840;
XX
DT 19-MAR-2008 (Rel. 95, Created)
DT 19-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE Potato virus Y partial gene for polyprotein, P1 and helper
DE component-proteinase, HC-Pro region, genomic RNA, isolate Gansu15
XX
KW helper component-proteinase, HC-Pro; P1; polyprotein.
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1461
RA Li X.;
RT ;
RL Submitted (19-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN [2]
RA Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1461
FT /organism="Potato virus Y"
FT /specific_host="Nicotiana tabacum"
FT /lab_host="Nicotiana tabacum"
FT /isolate="Gansu15"
FT /mol_type="genomic RNA"
FT /country="China:Gansu"
FT /db_xref="taxon:12216"
FT CDS <1. .>1461
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="CAJ87167.1"
FT /translation="GLFIVRGSHEGKIYDARSKVTQGVLDSMVQFSNAESFWKGLDGNW
FT ARMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTCAQQYANLPASDLLKLLH
FT RHASDGLSRLGADKDRFVHVSKFLTVLEHLTEPVDLNLEIFNEVFKSIGEKQQSPFKNL
FT NILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKANWNL
FT YLSCDNQLDKNANFLWGQREYHAKRFFSNFFEEIDPAKGYSAYETRLHPNGRRKLAIGN
FT LIVPLDLAEFRRKMKGDYKSQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFYPPT
FT KKHLVIGNSGDQKYVDLPKGNSEMLYIAKQGFCYINIFLAMLINISEEDAKDFTKKVRD
FT MCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQTTGY
FT HILKASSVSQLILFANDELESDIKHYRVG"
FT mat_peptide <1. .93
FT /product="P1"
FT mat_peptide 94. .1461
FT /product="helper component-proteinase, HC-Pro"
XX
SQ Sequence 1461 BP; 452 A; 276 C; 342 G; 391 T; 0 other;
am236840 Length: 1461 19-MAR-2008 Type: N Check: 27 ..
1 ggcctattca tagtgcgtgg atcgcatgaa ggaaaaatct atgatgcgcg
51 ttccaaggtt acacaaggag ttctagactc aatggttcag ttctcaaacg
101 ctgaaagctt ctggaaggga ttggacggca attgggcacg gatgagatac
151 cctacagatc atacatgcgt agcaggctta ccagttgaag actgtggcag
201 agtagcagca ataatgacac acagtattct accgtgctat aagataacct
251 gtcccacctg tgctcaacag tatgccaact tgccagccag tgatttgctc
301 aaattattac acaggcacgc aagtgatggt ttaagtcgat tgggagcgga
351 taaagatcgc tttgtgcatg tcagcaagtt cttgacagtc ctagagcact
401 tgactgaacc agttgatcta aatctagaaa tcttcaatga agtattcaag
451 tctataggag aaaagcaaca atcacctttc aaaaacctga atattctgaa
501 taatttcttt ttgaaaggaa aggagaatac agctcgtgaa tggcaagtgg
551 ctcaattaag cttacttgaa ttggcaagat tccaaaagaa caggacggat
601 aatatcaaga aaggtgacat ctcgttcttc aggaataagc tatccgccaa
651 agctaattgg aacttgtatc tgtcatgcga taatcagttg gataagaacg
701 caaacttcct gtggggacag agggaatatc atgccaagcg gtttttctcg
751 aactttttcg aggaaattga tccagcgaag ggctactcag cgtacgaaac
801 tcgtttgcat ccgaatggga gaagaaaact tgcaattgga aacctaattg
851 ttccactcga tctggctgag tttaggcgga agatgaaagg tgattataaa
901 agccagccag gggtgagtaa gaagtgcacg agctcgaagg atggaaacta
951 cgtgtatccc tgttgttgta ctacactcga tgatggctca gctgttgaat
1001 caacatttta cccgccaact aaaaagcacc ttgtaatagg taacagcggt
1051 gatcaaaagt atgttgatct accaaaaggg aattctgaaa tgttatacat
1101 tgccaagcaa gggttttgtt atattaatat attccttgcg atgttgatta
1151 acattagtga ggaagatgca aaggatttca cgaagaaggt tcgtgacatg
1201 tgtgtgccaa agcttggaac ctggccaacc atgatggatc tggctactac
1251 ttgtgctcaa atgaaaatat tctaccctga tgttcatgat gcagagctgc
1301 ccaggatact agttgaccat gaaactcaga catgccatgt ggtcgactcg
1351 tttggttcgc aaacaactgg ttatcatatt ttgaaggcat ctagcgtgtc
1401 tcagcttatc ttgtttgcaa acgatgagtt ggaatctgat ataaaacatt
1451 atagagttgg t