Sequence of DPV Potato virus Y
Potato virus Y partial gene for polyprotein, P1 and helper component-proteinase, HC-Pro region, genomic RNA, isolate Zhucheng37
ACC No: AM236849
Dated: 2008-03-19 | Length: 1461 | CRC: -491208583
ID AM236849; SV 1; linear; genomic RNA; STD; VRL; 1461 BP.
XX
AC AM236849;
XX
DT 19-MAR-2008 (Rel. 95, Created)
DT 19-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE Potato virus Y partial gene for polyprotein, P1 and helper
DE component-proteinase, HC-Pro region, genomic RNA, isolate Zhucheng37
XX
KW helper component-proteinase, HC-Pro; P1; polyprotein.
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1461
RA Li X.;
RT ;
RL Submitted (19-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN [2]
RA Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1461
FT /organism="Potato virus Y"
FT /specific_host="Nicotiana tabacum"
FT /lab_host="Nicotiana tabacum"
FT /isolate="Zhucheng37"
FT /mol_type="genomic RNA"
FT /country="China:Zhucheng"
FT /db_xref="taxon:12216"
FT CDS <1. .>1461
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="CAJ87176.1"
FT /translation="GLFIVRGSHEGKIYDARSKVTQGVMDSMIQFSSAESFWKGLDGNW
FT AQMRYPTDHTCVAGLPVEDCGRVAAIITHSILPCYKITCPTCAQQYANLPASDLLKILH
FT KHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFNEVFKSIGEKQQSPFKNL
FT NILNNFFLKGKENTAREWQVAQLSLLELARFPKNRTDIIKKGDISCFRNKLSAKANWNL
FT YLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSAYENRLHPNGTRKLAIGN
FT LIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFYPPT
FT KKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAMLINISEEDAKDFTKKVRD
FT MCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQTTGY
FT HILKASSVSQLILFANDELESDIKHYRVG"
FT mat_peptide <1. .93
FT /product="P1"
FT mat_peptide 94. .1461
FT /product="helper component-proteinase, HC-Pro"
XX
SQ Sequence 1461 BP; 461 A; 272 C; 335 G; 393 T; 0 other;
am236849 Length: 1461 19-MAR-2008 Type: N Check: 9089 ..
1 ggcctattca tagtgcgtgg gtcgcatgaa ggaaaaatct atgatgcacg
51 ttccaaggtt acccaagggg ttatggactc aatgattcag ttctccagcg
101 ctgaaagctt ttggaaggga ttggacggca attgggcaca aatgagatat
151 cctacagatc atacatgtgt ggcaggctta ccagttgaag actgtggcag
201 agttgcagcg ataataacac acagtatttt accgtgctat aaaataacct
251 gccctacctg cgcccaacaa tatgccaact tgccagccag tgacttactt
301 aagatattac acaagcacgc aagtgatggt ctaaatcgat tgggggcaga
351 caaagatcgc tttgtgcatg tcaaaaagtt cttgacaatc ttagagcact
401 taactgaacc ggttgatctg agtctagaaa ttttcaatga agtattcaag
451 tctatagggg agaagcaaca atcacctttc aaaaacctga atattctgaa
501 taatttcttt ttgaaaggaa aggaaaatac agctcgtgaa tggcaggtgg
551 ctcaattaag cttacttgaa ttggcaagat tcccaaagaa cagaacggat
601 attatcaaga aaggagacat ctcgtgcttt aggaataaac tatctgccaa
651 agcaaattgg aacttgtatc tgtcatgtga taaccagctg gataagaatg
701 caaatttcct gtggggacag agggaatatc atgctaagcg atttttctcg
751 aactatttcg aggaaattga tccagcgaag ggctattcag catacgaaaa
801 tcgtttgcat ccgaatggga caagaaaact tgcaattgga aacctaattg
851 taccacttga tctggctgag tttaggcgga agatgaaagg tgattataaa
901 agacagccag gggtgagtaa gaagtgcacg agctcgaagg atggaaacta
951 cgtgtatccc tgttgttgca ctacacttga tgatggctca gctgttgaat
1001 caacatttta cccgccaact aagaagcacc tcgtaatagg taatagtggc
1051 gaccaaaagt atgttgactt accaaaaggg aattctgaga tgttatatat
1101 tgccaggcaa ggcttctgtt acattaacat tttcctcgcg atgttgatta
1151 acattagtga ggaagatgca aaggatttca ctaagaaggt tcgtgacatg
1201 tgtgtgccaa agcttggaac ctggccaacc atgatggatc tggctacaac
1251 ttgtgctcaa atgaaaatat tctaccctga tgttcatgat gcagaactgc
1301 ctagaatact agtcgatcac gaaacgcaga catgccatgt ggttgattcg
1351 tttggctcac aaacaactgg ctatcatatt ttgaaagcat ctagcgtgtc
1401 ccaacttatt ttgtttgcta atgatgagtt ggagtctgat ataaaacatt
1451 atagagttgg t